Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_B19
(841 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 153 5e-36
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 104 2e-21
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 75 2e-12
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 67 6e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 52 2e-05
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 42 0.025
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.078
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 38 0.31
UniRef50_Q1ENX3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.1
UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: Co... 33 8.9
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 33 8.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 153 bits (371), Expect = 5e-36
Identities = 77/118 (65%), Positives = 81/118 (68%)
Frame = +1
Query: 487 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPPGKLPRALSCFR 666
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP + P FR
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL-EAPSCALLFR 60
Query: 667 PCRLPDTCPPFSLREAWRFLIAHAVXISVRCKVVRSXLGCVHEPPVXPDRXXYXYYVV 840
PCRLPDTCPPFSLREAWRFLIAHAV ISVRC+ PP P Y +V
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIV 118
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 104 bits (250), Expect = 2e-21
Identities = 66/121 (54%), Positives = 71/121 (58%)
Frame = +1
Query: 319 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 498
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 499 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPPGKLPRALSCFRPCRL 678
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFP P F P L
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL-VAPSCALLFLPFGL 132
Query: 679 P 681
P
Sbjct: 133 P 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +1
Query: 505 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP 630
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFP
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFP 85
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 66.9 bits (156), Expect = 6e-10
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +3
Query: 663 PTLPLTGYLSAFLPSGSVALSHSSRCXYLSSV 758
PTLPLTGYLSAFLPSGSVALSHSSRC YLSSV
Sbjct: 6 PTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 495 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 382
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 295 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 462
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/72 (41%), Positives = 39/72 (54%)
Frame = -1
Query: 811 RVXRGVRAHSPXWSERPYTELRYXQREL*ESATLPEGRKADRYPVSGRVGNRRAHEGAXQ 632
R RGVRA+SP WSERP ++ P+G+KA++ + NRRAHEGA
Sbjct: 23 RAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGA-A 81
Query: 631 GGNAWYLYSPVG 596
G + SPVG
Sbjct: 82 GEKSPASLSPVG 93
Score = 38.3 bits (85), Expect = 0.24
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -2
Query: 756 PN*DTYSVSYEKAPRFPKGER 694
P+ DT SVSYEKAPRFPKG++
Sbjct: 41 PSRDTSSVSYEKAPRFPKGKK 61
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 414 HSKAVIRLSTESGDNAGKNM 473
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 221 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 343
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 394 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 567
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 568 IDAQVRGGETRQDYKDTRRFP 630
I Q + +T+ +YK T FP
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFP 102
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 41.5 bits (93), Expect = 0.025
Identities = 29/82 (35%), Positives = 32/82 (39%)
Frame = +1
Query: 580 VRGGETRQDYKDTRRFPPGKLPRALSCFRPCRLPDTCPPFSLREAWRFLIAHAVXISVRC 759
VR GETRQD K LP ALSC P PPFSL + + IS RC
Sbjct: 23 VRSGETRQDLKIIT-VSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARC 81
Query: 760 KVVRSXLGCVHEPPVXPDRXXY 825
+ PP P Y
Sbjct: 82 RSFAPSWAVSKNPPFSPTAAPY 103
Score = 37.1 bits (82), Expect = 0.55
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 665 DPAAYRIPVRLSPFGKRGAFS*LTLXVSQFGVR--SFAPXWAVCTNPPXNPT 814
+PA RIPV PF G+ + S R SFAP WAV NPP +PT
Sbjct: 50 NPAVSRIPV--PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPT 99
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.078
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 365 ERGSGRAPNTQTASPRALADSLMQ 294
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 37.9 bits (84), Expect = 0.31
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1
Query: 814 GRVXRGVRAHSPXWSERP 761
GR RGVRAHSP WSERP
Sbjct: 22 GRAERGVRAHSPAWSERP 39
>UniRef50_Q1ENX3 Cluster: Putative uncharacterized protein; n=1;
Musa acuminata|Rep: Putative uncharacterized protein -
Musa acuminata (Banana)
Length = 359
Score = 35.1 bits (77), Expect = 2.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 724 ESATLPEGRKADRYPVSGRVGNRRAHEGAXQGGNAW 617
++A + EGR+ D+ + G VG RR G GG W
Sbjct: 211 DAAIMGEGRRRDQAALGGSVGGRRGRGGGGGGGGGW 246
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.1
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 504 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 382
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: CobN
- Silicibacter pomeroyi
Length = 1097
Score = 33.1 bits (72), Expect = 8.9
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -2
Query: 669 GSETGERTRELXRGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 514
G E E +L G++P +VLS F+ SDL +GGGA GK P R
Sbjct: 10 GLEETETPTDL--GQSPADLVVLS-FSDSDLGAFAAGWHRGGGAVGKLPTLR 58
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 33.1 bits (72), Expect = 8.9
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +1
Query: 97 DPXMXSYIDXFGQTTTXMQ 153
DP M YID FGQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,729,513
Number of Sequences: 1657284
Number of extensions: 14856774
Number of successful extensions: 37474
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 35828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37430
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -