Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B19
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0691 + 12999452-12999820                                         31   1.1  
06_01_0185 - 1437693-1437834,1437969-1438078,1438214-1438264,143...    30   2.0  
04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437...    30   2.6  
05_01_0027 + 178942-179055,179140-179253                               29   4.6  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.1  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.1  
04_03_0380 - 15150814-15152304                                         28   8.1  
04_03_0348 + 14735581-14737071                                         28   8.1  
02_03_0142 - 15676923-15677159                                         28   8.1  

>02_02_0691 + 12999452-12999820
          Length = 122

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = +1

Query: 487 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPPGKLPRALSCFR 666
           S+ P    +PR WR ++GS     I+   A  RGG  R + +  RR   G L  A+  FR
Sbjct: 12  SEAPVVAPKPRGWRMAVGSIGGGGISPPVA--RGGR-RGERERGRRSAGGGLTGAVDAFR 68

Query: 667 P 669
           P
Sbjct: 69  P 69


>06_01_0185 -
           1437693-1437834,1437969-1438078,1438214-1438264,
           1438877-1439122,1439244-1439315,1439614-1439648,
           1439755-1439845,1440546-1440610,1440733-1440813,
           1441020-1441137,1441535-1441627,1441865-1441997,
           1442471-1442503,1443264-1443343,1443444-1443549,
           1443621-1443795,1443884-1443980,1444819-1445251,
           1445329-1445459,1446052-1446341,1446429-1447002
          Length = 1051

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 573 RSSQRWRNPTGL*RYQAFPPWXAPSCAL 656
           RS +RWR+   +  + AF    APSCAL
Sbjct: 321 RSRRRWRHAAAISSFSAFVAENAPSCAL 348


>04_04_1105 -
           30942735-30942791,30943116-30943466,30943670-30943762,
           30943869-30944072,30944155-30944399,30945019-30945877,
           30946070-30946936,30947113-30947562
          Length = 1041

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = +1

Query: 673 RLPDTCPPFSLREAWRFLIA-----HAVXISVRCKVVRS 774
           RL D C P  L+E WRFL+A      A   S RCK  R+
Sbjct: 849 RLAD-CDPRVLKEQWRFLVAFWNTEEAQAASARCKASRA 886


>05_01_0027 + 178942-179055,179140-179253
          Length = 75

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 622 RFPPGKLPRALSCFRPCRL-PDTCPPFSL 705
           RFPP K     SC RPC L P T P F+L
Sbjct: 25  RFPP-KAYLCDSCLRPCTLHPTTIPAFAL 52


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 352 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 507
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>04_03_0380 - 15150814-15152304
          Length = 496

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 719 RHASRREKGGQVSGKRQGRKQESARGSXPGG 627
           R A   EKG ++  +  G K+ +AR + PGG
Sbjct: 440 REAMEGEKGAEMRRRAAGWKEAAARAARPGG 470


>04_03_0348 + 14735581-14737071
          Length = 496

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 719 RHASRREKGGQVSGKRQGRKQESARGSXPGG 627
           R A   EKG ++  +  G K+ +AR + PGG
Sbjct: 440 REAMEGEKGAEMRRRAAGWKEAAARAARPGG 470


>02_03_0142 - 15676923-15677159
          Length = 78

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 728 MRKRHASRREKGGQVSGKRQGRKQESARGSXPGGKR 621
           M KR  +RR   G+  GKR+G +     G+   G+R
Sbjct: 26  MGKRLGARRRAAGRRMGKRRGEEGTGTPGAGAAGRR 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,756,363
Number of Sequences: 37544
Number of extensions: 455435
Number of successful extensions: 1311
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)