Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B19
         (841 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537403-1|CAD97645.1| 1068|Homo sapiens hypothetical protein pr...    32   2.3  
BC141880-1|AAI41881.1| 1068|Homo sapiens ubiquitin protein ligas...    31   5.2  
AF251046-1|AAK28419.2| 1068|Homo sapiens UBE3B variant 1 protein.      31   5.2  

>BX537403-1|CAD97645.1| 1068|Homo sapiens hypothetical protein
            protein.
          Length = 1068

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 586  GGETRQDYKDTRRFPPGKLPRALSCFRPCRLPDTCPPFSLREAWRFLIA 732
            G   R  +   +R P G+LP + +CF   +LP+      LRE  R+ I+
Sbjct: 1012 GSVLRGSFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAIS 1060


>BC141880-1|AAI41881.1| 1068|Homo sapiens ubiquitin protein ligase E3B
            protein.
          Length = 1068

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 586  GGETRQDYKDTRRFPPGKLPRALSCFRPCRLPDTCPPFSLREAWRFLIA 732
            G   R  +   +R P G+LP + +CF   +LP+      LRE  R+ I+
Sbjct: 1012 GSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAIS 1060


>AF251046-1|AAK28419.2| 1068|Homo sapiens UBE3B variant 1 protein.
          Length = 1068

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 586  GGETRQDYKDTRRFPPGKLPRALSCFRPCRLPDTCPPFSLREAWRFLIA 732
            G   R  +   +R P G+LP + +CF   +LP+      LRE  R+ I+
Sbjct: 1012 GSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAIS 1060


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,717,724
Number of Sequences: 237096
Number of extensions: 2411505
Number of successful extensions: 10764
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10763
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)