Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B17
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0734 - 26774471-26774652,26775008-26775137,26775447-267755...    29   3.8  
11_04_0051 + 12863978-12864476,12864575-12864674,12865567-128656...    29   3.8  
09_03_0156 - 12844549-12845138,12845237-12845723                       29   3.8  
04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.8  

>11_06_0734 -
           26774471-26774652,26775008-26775137,26775447-26775596,
           26775685-26775918,26775990-26776161,26776285-26776506,
           26776604-26776770,26776880-26777018,26777342-26777693,
           26778175-26778370
          Length = 647

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 751 DVGLNAYYYYFHSHLPFWWXSGKYGAFKERRGEXYFXFYQQLL 879
           + G+      FH  LP W  +GKYG +K  +   YF  + +L+
Sbjct: 247 EYGMKVMLTLFHHSLPPW--AGKYGGWKMEKTVTYFMDFVRLV 287


>11_04_0051 +
           12863978-12864476,12864575-12864674,12865567-12865657,
           12866114-12866176,12866364-12866549,12866994-12867024,
           12867054-12867502
          Length = 472

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +1

Query: 631 EKICYNYGIIKENEXFVMYANYSNSLTYPNNEDRIAYLTEDVGLNAYYYYF 783
           E+    + + + N  F+   N    LTY   E+  A LTE+  L  Y  Y+
Sbjct: 66  EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYY 116


>09_03_0156 - 12844549-12845138,12845237-12845723
          Length = 358

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +1

Query: 631 EKICYNYGIIKENEXFVMYANYSNSLTYPNNEDRIAYLTEDVGLNAYYYYF 783
           E+    + + + N  F+   N    LTY   E+  A LTE+  L  Y  Y+
Sbjct: 62  EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYY 112


>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 263  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 361
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,546,184
Number of Sequences: 37544
Number of extensions: 397750
Number of successful extensions: 1038
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)