Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B14
         (893 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   5.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.5  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   9.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.9  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 312 ARSLNSPHPHRPSAFHRCQLNTSERD 389
           A +L  PHP+    FH     T+ R+
Sbjct: 104 AANLLRPHPYLSPLFHSAAPRTASRE 129


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 330  PHPHRPSAFHRCQL 371
            P PH  +A++RC L
Sbjct: 1110 PDPHNCNAYYRCVL 1123


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 174 EKIRDHRQILAKTRQKPVHQE 236
           +KI + +++L++   +PVH E
Sbjct: 31  DKILEAQRLLSEQNNQPVHDE 51


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 174 EKIRDHRQILAKTRQKPVHQE 236
           +KI + +++L++   +PVH E
Sbjct: 31  DKILEAQRLLSEQNNQPVHDE 51


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 174 EKIRDHRQILAKTRQKPVHQE 236
           +KI + +++L++   +PVH E
Sbjct: 31  DKILEAQRLLSEQNNQPVHDE 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,848
Number of Sequences: 336
Number of extensions: 1820
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)