Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B14
         (893 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029051-1|ABJ16984.1|  462|Drosophila melanogaster IP06003p pro...    30   3.7  
AE014297-1018|AAN13440.1|  121|Drosophila melanogaster CG31412-P...    30   3.7  
BT001485-1|AAN71240.1|  339|Drosophila melanogaster LD22928p pro...    29   8.6  
AF171098-1|AAD55391.1|  226|Drosophila melanogaster methyl-CpG b...    29   8.6  
AE014297-969|AAF54401.1|  226|Drosophila melanogaster CG8208-PB,...    29   8.6  
AE014297-968|AAF54400.2|  339|Drosophila melanogaster CG8208-PA,...    29   8.6  

>BT029051-1|ABJ16984.1|  462|Drosophila melanogaster IP06003p
           protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -3

Query: 375 C*ADTGGRRMDDGGEGSSGTWRLGHVLDVGEYRVF*AVPSIGAATTLPGAQVFGESWQEF 196
           C  D+GG  MDDG  G  GT   G    +G   +    P++   TT+PG      S+ ++
Sbjct: 397 CRGDSGGPFMDDGTSGVFGT--SGRYTIIG---IVAFGPTLCGVTTIPGVYTLVSSFSDW 451

Query: 195 V 193
           +
Sbjct: 452 I 452


>AE014297-1018|AAN13440.1|  121|Drosophila melanogaster CG31412-PA
           protein.
          Length = 121

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -3

Query: 375 C*ADTGGRRMDDGGEGSSGTWRLGHVLDVGEYRVF*AVPSIGAATTLPGAQVFGESWQEF 196
           C  D+GG  MDDG  G  GT   G    +G   +    P++   TT+PG      S+ ++
Sbjct: 56  CRGDSGGPFMDDGTSGVFGT--SGRYTIIG---IVAFGPTLCGVTTIPGVYTLVSSFSDW 110

Query: 195 V 193
           +
Sbjct: 111 I 111


>BT001485-1|AAN71240.1|  339|Drosophila melanogaster LD22928p
           protein.
          Length = 339

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 111 TSRSLVFEIQR*TAGVNDKIEEKIRDHRQILAKTRQKPVHQEG*SPRQ-YWE 263
           T  SLV  I++ TA +  +    IR+H+Q  AK + +P H     P+Q +WE
Sbjct: 182 TDVSLVPPIRQ-TASIFKQPVTVIRNHKQDPAKAKNEPKHGTREKPKQLFWE 232


>AF171098-1|AAD55391.1|  226|Drosophila melanogaster methyl-CpG
           binding domain-likeprotein protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 111 TSRSLVFEIQR*TAGVNDKIEEKIRDHRQILAKTRQKPVHQEG*SPRQ-YWE 263
           T  SLV  I++ TA +  +    IR+H+Q  AK + +P H     P+Q +WE
Sbjct: 69  TDVSLVPPIRQ-TASIFKQPVTVIRNHKQDPAKAKNEPKHGTREKPKQLFWE 119


>AE014297-969|AAF54401.1|  226|Drosophila melanogaster CG8208-PB,
           isoform B protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 111 TSRSLVFEIQR*TAGVNDKIEEKIRDHRQILAKTRQKPVHQEG*SPRQ-YWE 263
           T  SLV  I++ TA +  +    IR+H+Q  AK + +P H     P+Q +WE
Sbjct: 69  TDVSLVPPIRQ-TASIFKQPVTVIRNHKQDPAKAKNEPKHGTREKPKQLFWE 119


>AE014297-968|AAF54400.2|  339|Drosophila melanogaster CG8208-PA,
           isoform A protein.
          Length = 339

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 111 TSRSLVFEIQR*TAGVNDKIEEKIRDHRQILAKTRQKPVHQEG*SPRQ-YWE 263
           T  SLV  I++ TA +  +    IR+H+Q  AK + +P H     P+Q +WE
Sbjct: 182 TDVSLVPPIRQ-TASIFKQPVTVIRNHKQDPAKAKNEPKHGTREKPKQLFWE 232


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,713,060
Number of Sequences: 53049
Number of extensions: 371957
Number of successful extensions: 709
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)