Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B12
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   2.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   5.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   9.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.6  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 402 NDGIYVYKTGDKSFKKYGTFKADVISLTKLNGSDLF 509
           N+G Y Y T  KS     T    V++ T + G D F
Sbjct: 103 NEGSYKYSTVAKSAALRATMVQSVLNFTDVWGFDGF 138


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 446 FKAFISGFIYIYPVIASYVYRAVIIIT*IPSFVQYFD 336
           F  F+S  IY+   ++++ Y    I+  I  +  YFD
Sbjct: 189 FLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFD 225


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 446 FKAFISGFIYIYPVIASYVYRAVIIIT*IPSFVQYFD 336
           F  F+S  IY+   ++++ Y    I+  I  +  YFD
Sbjct: 115 FLMFVSYNIYVCQTVSNFEYFQRKILLMIQLYYLYFD 151


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 581 FIIQNVFVTIFSDFVSFIVVCYGVKQIAS 495
           F   N +  I +D +S  + C G   IAS
Sbjct: 80  FPTANSYPAIVADILSGAIACIGFSWIAS 108


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 528 NKAYKVTENGNKYVLD 575
           N +YKV  NGN  V D
Sbjct: 16  NLSYKVMYNGNNNVTD 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,787
Number of Sequences: 336
Number of extensions: 3318
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)