Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B12
         (873 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74041-1|CAA98520.1|  255|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z79756-11|CAB02119.2|  614|Caenorhabditis elegans Hypothetical p...    29   5.7  
AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm rece...    29   5.7  
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical...    28   7.6  

>Z74041-1|CAA98520.1|  255|Caenorhabditis elegans Hypothetical
           protein T03F7.5 protein.
          Length = 255

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -2

Query: 518 YGVKQIASVQFC*AYNVSFESTIFFKAF-ISGFIYIYPVIASYVYRAVII 372
           + ++++ S+QF        + T+FFK F ++GF++      SYVY  VI+
Sbjct: 54  FTIERVLSIQFS-----KIQRTLFFKLFFLAGFVFENGFAISYVYTNVIL 98


>Z79756-11|CAB02119.2|  614|Caenorhabditis elegans Hypothetical
           protein F53C11.6 protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 653 YFXIQSDIVQYIEVIKHNLFDGFQFIIQNVFVTIFSDFV 537
           Y  + S I+ ++E    N+ DGF F++ +V    F D V
Sbjct: 255 YIGLSSWIISWVE--NWNMMDGFYFVMMSVLTIGFGDLV 291


>AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 66 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 575 IQNVFVTIFSDFVSFIVVCYGVKQIASVQFC*AYNVSFES--TIFFKAFISGFIYIYPVI 402
           I N F+T++S    F +  +      SV F   Y   F+S  T FF+ F  G   +YP++
Sbjct: 86  ISNAFITVWS---CFYLTTFS---FISVLFIYRYLCLFDSSKTRFFEGFKGGLWMLYPLL 139

Query: 401 ASYVYRAVI 375
               Y + I
Sbjct: 140 PGICYASTI 148


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 223 TKAPTT*SSVEYSSTLRCLKTEPLSTLEAATLXPTTKM 110
           T+APTT + +  +     L+TE L T ++ T+ P TK+
Sbjct: 798 TEAPTTEAPMTITPRTEQLRTEQLRTDQSKTVTPKTKI 835


>AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.12a protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 19/70 (27%), Positives = 36/70 (51%)
 Frame = -3

Query: 592 TAFNLSSKTYLLPFSVTL*ALLSFVTA*NKSLPFNFVRLITSALKVPYFLKLLSPVLYTY 413
           T    + +   L F +T+  L  F+   N +LP+ F+       +  Y+LK ++ V++  
Sbjct: 18  TLTGCAQRELFLTFLITMLGL--FIR--NLTLPWIFLGRRYDTGRFTYWLKFVADVIFLC 73

Query: 412 IPSLLATYIV 383
           +PSLLA  ++
Sbjct: 74  VPSLLAMTVL 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,033,863
Number of Sequences: 27780
Number of extensions: 298120
Number of successful extensions: 873
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)