Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B11
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.4  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   3.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   4.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 289 NRPNARGEAVCVLGALPLPRSLTR 360
           N+PN+    + +   +PLPR L R
Sbjct: 439 NKPNSSDLNMLIKETMPLPRKLVR 462


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = -1

Query: 534 GGASLWKTPATRPFYG-SW 481
           GGAS  K   + PFYG SW
Sbjct: 235 GGASASKVTLSVPFYGHSW 253


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = +3

Query: 174 IALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALNESAKR 302
           +A+F+    C++    +NC+   FQ +  + E+ S +N+ A++
Sbjct: 327 LAIFILYFICDEAHYASNCLRVQFQKKLLLVEL-SWMNDEAQQ 368


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 618 GASGGTPVXYSPVGFAP 568
           G  G TPV   P GF+P
Sbjct: 14  GWMGLTPVSVEPTGFSP 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,300
Number of Sequences: 336
Number of extensions: 2666
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)