Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B10
         (873 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     25   2.3  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    23   9.2  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 57  LHLVLSVRGGGQLFNK 104
           LHLVL +RGG Q+F K
Sbjct: 67  LHLVLRLRGGMQIFVK 82



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 57  LHLVLSVRGGGQLFNK 104
           LHLVL +RGG Q+F K
Sbjct: 143 LHLVLRLRGGMQIFVK 158


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 349 ENGNFVTVNXQGIHPEPQHCP 287
           E G  V +   GIH +P+H P
Sbjct: 331 EAGTSVMIPVLGIHHDPEHFP 351


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 863,923
Number of Sequences: 2352
Number of extensions: 17029
Number of successful extensions: 32
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)