Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B09
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL353779-1|CAI20975.1|  250|Homo sapiens chromosome 1 open readi...    30   9.8  
AF005081-1|AAB83961.1|  112|Homo sapiens skin-specific protein p...    30   9.8  

>AL353779-1|CAI20975.1|  250|Homo sapiens chromosome 1 open reading
           frame 68 protein.
          Length = 250

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 426 HTQGRTPCSTELIQPFS*ALLSQYFLXTSSSAPFGLASSISVFRTFKSTSPLRQF 262
           + QG +PC +  +Q  +    SQY +    SAP   +      RTF   SPLR++
Sbjct: 133 YVQGASPCQSYYVQAPASGSTSQYCVTDPCSAPCSTSYCCLAPRTF-GVSPLRRW 186


>AF005081-1|AAB83961.1|  112|Homo sapiens skin-specific protein
           protein.
          Length = 112

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 426 HTQGRTPCSTELIQPFS*ALLSQYFLXTSSSAPFGLASSISVFRTFKSTSPLRQF 262
           + QG +PC +  +Q  +    SQY +    SAP   +      RTF   SPLR++
Sbjct: 3   YVQGASPCQSYYVQAPASGSTSQYCVTDPCSAPCSTSYCCLAPRTF-GVSPLRRW 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,482,151
Number of Sequences: 237096
Number of extensions: 1842313
Number of successful extensions: 3612
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3612
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)