Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B07
         (877 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04142 Cluster: Cecropin-B precursor; n=16; Obtectomera...    44   0.007
UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Re...    43   0.012

>UniRef50_P04142 Cluster: Cecropin-B precursor; n=16;
           Obtectomera|Rep: Cecropin-B precursor - Bombyx mori
           (Silk moth)
          Length = 63

 Score = 43.6 bits (98), Expect = 0.007
 Identities = 20/35 (57%), Positives = 22/35 (62%)
 Frame = +2

Query: 167 AAPXPXWXLFKXXXXXGXHXRAGIVKAGPAXXVLG 271
           AAP P W +FK     G + R GIVKAGPA  VLG
Sbjct: 22  AAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLG 56


>UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Rep:
           Cecropin-A precursor - Hyalophora cecropia (Cecropia
           moth)
          Length = 64

 Score = 42.7 bits (96), Expect = 0.012
 Identities = 19/35 (54%), Positives = 22/35 (62%)
 Frame = +2

Query: 167 AAPXPXWXLFKXXXXXGXHXRAGIVKAGPAXXVLG 271
           AAP P W LFK     G + R GI+KAGPA  V+G
Sbjct: 22  AAPEPKWKLFKKIEKVGQNIRDGIIKAGPAVAVVG 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,920,851
Number of Sequences: 1657284
Number of extensions: 3781468
Number of successful extensions: 22307
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17500
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)