Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B07
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544...    29   6.5  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    29   6.5  

>04_04_0137 -
           23053148-23053798,23053911-23054146,23054268-23054458,
           23054587-23056010
          Length = 833

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 633 GPXXPPPKXXTPPPXP 586
           GP  PPP   TPPP P
Sbjct: 391 GPAVPPPPPPTPPPPP 406


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = -2

Query: 687 PXXFXXXPXXPXXFFXXWGPXXPPPKXXTPPPXP 586
           P  F   P  P  F    GP   PP    PPP P
Sbjct: 506 PPPFPSAPNTPPGFQGLAGPFYGPPYPAPPPPPP 539


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,522,385
Number of Sequences: 37544
Number of extensions: 146883
Number of successful extensions: 1303
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)