Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B05
         (890 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4D0G5 Cluster: Serine/threonine protein kinase, putati...    35   3.2  
UniRef50_Q4JLG8 Cluster: Lr1543; n=5; Lactobacillus|Rep: Lr1543 ...    34   5.6  
UniRef50_A5NQG8 Cluster: Putative uncharacterized protein precur...    34   5.6  
UniRef50_UPI0000EBE020 Cluster: PREDICTED: similar to coiled-coi...    33   7.4  
UniRef50_A7TNN8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_A5E7E0 Cluster: Predicted protein; n=1; Lodderomyces el...    33   7.4  
UniRef50_A4J7B2 Cluster: Putative uncharacterized protein; n=1; ...    33   9.8  

>UniRef50_Q4D0G5 Cluster: Serine/threonine protein kinase, putative;
           n=5; Trypanosoma cruzi|Rep: Serine/threonine protein
           kinase, putative - Trypanosoma cruzi
          Length = 939

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -1

Query: 446 CLWSISLVNSSTNCPPVAPKVWRFPRRHRCPRTWSTLAWTT 324
           C   ++++ S   CPP   K W +  R RCP ++++  W+T
Sbjct: 316 CETELTVIGSGVYCPPEIAKYWGY--RKRCPYSYASDVWST 354


>UniRef50_Q4JLG8 Cluster: Lr1543; n=5; Lactobacillus|Rep: Lr1543 -
           Lactobacillus reuteri
          Length = 333

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +1

Query: 412 VEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNLYNPTANGRQSDTN 558
           V + T+EI+Q++++ +T     +Q I   K + RN+YN T N  Q   N
Sbjct: 216 VGDTTKEINQQKKQGTTPTQNQIQVIFNQKLEERNIYNETKNHEQPIIN 264


>UniRef50_A5NQG8 Cluster: Putative uncharacterized protein
           precursor; n=1; Methylobacterium sp. 4-46|Rep: Putative
           uncharacterized protein precursor - Methylobacterium sp.
           4-46
          Length = 1182

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = +3

Query: 159 AGCVRDGSGAVRXGRLH-QEEXXRHAGHRTDEGSKTENEFR*EPRLPQPGPGPXMRSCPG 335
           AG  R   GA   GRLH + E   H    +  G       R  P  P P PG   R  PG
Sbjct: 185 AGAARPHPGARPPGRLHGRAERRAHPPEASRRGPDRRGRPRPGPPRPDPRPGLRGRGLPG 244

Query: 336 EG 341
            G
Sbjct: 245 RG 246


>UniRef50_UPI0000EBE020 Cluster: PREDICTED: similar to coiled-coil
           domain containing 66; n=1; Bos taurus|Rep: PREDICTED:
           similar to coiled-coil domain containing 66 - Bos taurus
          Length = 492

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 419 SSTNCPPVAPKVW--RFPRRHRCPRTWSTLA 333
           +S NCPP++   W  RF R   CP  W TLA
Sbjct: 2   TSGNCPPLSSIDWLLRFQRSPFCPHKWQTLA 32


>UniRef50_A7TNN8 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 1341

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 457 STAPPFLLQSIEENKKKSRNLYNPTANGRQSDTNPNFIY*ENKDE 591
           S  P F+   I  NK  S N  N T NG++ + N N I  +N D+
Sbjct: 282 SNLPGFINNDIMNNKNNSNNNNNNTNNGQKKNDNQNKINDKNNDD 326


>UniRef50_A5E7E0 Cluster: Predicted protein; n=1; Lodderomyces
           elongisporus NRRL YB-4239|Rep: Predicted protein -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 234

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 16/53 (30%), Positives = 20/53 (37%)
 Frame = -3

Query: 270 HFQFLNPHPSGGLHXXYXPPDGGDPRAQHHCHHEHNQPCAAEHAXXL*XFPTP 112
           H    +PH  GG H  Y P     P   HH +H  +    A H+      P P
Sbjct: 93  HQHQYHPHHHGGAHDTYHPLTPPHPHNHHHSNHRQHFAKGAHHSHLSPRSPPP 145


>UniRef50_A4J7B2 Cluster: Putative uncharacterized protein; n=1;
           Desulfotomaculum reducens MI-1|Rep: Putative
           uncharacterized protein - Desulfotomaculum reducens MI-1
          Length = 147

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 285 PRLPQPGPGPXMRSC--PGEGTPCTWAAMATWKAP 383
           P  P PGPGP M  C  PG G  CT      W AP
Sbjct: 100 PGCPMPGPGP-MPGCPKPGAGHDCTSMQPPGWAAP 133


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,155,268
Number of Sequences: 1657284
Number of extensions: 16200770
Number of successful extensions: 49406
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 45627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49041
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)