Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_B05
         (890 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   4.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.8  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
          protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 18 HYXGXLXTFGPVDXRSRRTRPLNM 89
          H      T+G V+ R RR++PL +
Sbjct: 8  HSLERFCTYGNVNYRQRRSQPLKI 31


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 525 SYCKWTPKRY*SQLYL 572
           +YC WT +R    +YL
Sbjct: 147 TYCSWTSRRSKVMVYL 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,781
Number of Sequences: 336
Number of extensions: 3835
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)