Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A24
(914 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 95 9e-20
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 94 1e-19
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 94 1e-19
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 94 2e-19
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 4e-19
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 2e-18
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 3e-18
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 8e-18
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 75 1e-13
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 72 8e-13
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 66 3e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 41 0.002
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 36 0.060
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 94.7 bits (225), Expect = 9e-20
Identities = 59/135 (43%), Positives = 59/135 (43%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V VD E VVDEV G R LF E I GKED Y G
Sbjct: 113 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 172
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
IGKE VDLVL R K C G G GGG G G LLME V GKK K E
Sbjct: 173 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 232
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 233 FAIYPAPQISTAVVE 247
Score = 93.9 bits (223), Expect = 2e-19
Identities = 57/135 (42%), Positives = 59/135 (43%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V VD E VVDEV G R LF E I GKED Y G
Sbjct: 634 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 693
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +DLVL R K C G G GGG G G LLME V GKK K E
Sbjct: 694 TVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 753
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 754 FAIYPAPQVSTAVVE 768
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/51 (45%), Positives = 23/51 (45%)
Frame = +3
Query: 177 IKMXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
I E V VG GV GN CWE E G DG M K GGG D F
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 113
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/47 (44%), Positives = 22/47 (46%)
Frame = +3
Query: 189 EXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
E + VG GV GN CWE E G DG M K GGG D F
Sbjct: 515 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 561
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/47 (44%), Positives = 22/47 (46%)
Frame = +3
Query: 189 EXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
E + VG GV GN CWE E G DG M K GGG D F
Sbjct: 588 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 634
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 94.3 bits (224), Expect = 1e-19
Identities = 58/135 (42%), Positives = 59/135 (43%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V VD E VVDEV G R LF E I GKED Y G
Sbjct: 482 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 541
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE VDLVL R K C G G GGG G G LLME V GKK K E
Sbjct: 542 TVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 601
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 602 FAIYPAPQVSTAVVE 616
Score = 93.9 bits (223), Expect = 2e-19
Identities = 57/135 (42%), Positives = 59/135 (43%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V VD E VVDEV G R LF E + GKED Y G
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHY 108
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE VDLVL R K C G G GGG G G LLME V GKK K E
Sbjct: 109 TVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 168
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 169 FAIYPAPQVSTAVVE 183
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/49 (44%), Positives = 23/49 (46%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
M E + VG GV GN CWE E G DG M K GGG D F
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 49
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/47 (44%), Positives = 22/47 (46%)
Frame = +3
Query: 189 EXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
E + VG GV GN CWE E G DG M K GGG D F
Sbjct: 436 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 482
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 94.3 bits (224), Expect = 1e-19
Identities = 58/135 (42%), Positives = 59/135 (43%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V VD E VVDEV G R LF E I GKED Y G
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
IGKE +DLVL R K C G G GGG G G LLME V GKK K E
Sbjct: 109 TIGKEIIDLVLDRCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLE 168
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 169 FAIYPAPQISTAVVE 183
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/49 (44%), Positives = 23/49 (46%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
M E + VG GV GN CWE E G DG M K GGG D F
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 49
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 93.9 bits (223), Expect = 2e-19
Identities = 57/135 (42%), Positives = 59/135 (43%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V VD E VVDEV G R LF E I GKED Y G
Sbjct: 48 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 107
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +DLVL R K C G G GGG G G LLME V GKK K E
Sbjct: 108 TVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 167
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 168 FAIYPAPQVSTAVVE 182
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/47 (44%), Positives = 22/47 (46%)
Frame = +3
Query: 189 EXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
E + VG GV GN CWE E G DG M K GGG D F
Sbjct: 2 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 48
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 92.7 bits (220), Expect = 4e-19
Identities = 55/135 (40%), Positives = 59/135 (43%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V VD E V+DEV G R LF E I GKED Y G
Sbjct: 420 FNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 479
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +D+VL R K C G G GGG G G LLME V GKK K E
Sbjct: 480 TVGKEQIDIVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 539
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 540 FAIYPAPHISSAVVE 554
Score = 92.3 bits (219), Expect = 5e-19
Identities = 56/135 (41%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V D E VVDEV G R LF E I GKED Y G
Sbjct: 853 FNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 912
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +DLVL R K C G G GGG G G LLME V GKK K E
Sbjct: 913 TVGKEMIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 972
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 973 FAIYPAPQISTAVVE 987
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/47 (46%), Positives = 22/47 (46%)
Frame = +3
Query: 189 EXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
E V VG GV GN CWE E G DG M K GGG D F
Sbjct: 807 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 853
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/47 (44%), Positives = 22/47 (46%)
Frame = +3
Query: 189 EXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
E + VG GV GN CWE E G DG M K GGG D F
Sbjct: 374 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAF 420
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 90.6 bits (215), Expect = 2e-18
Identities = 53/135 (39%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V VD E V+DE+ G R LF E + GKED Y G
Sbjct: 14 FNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHY 73
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +DL L R K C G G GGG G G LLME V GKK K E
Sbjct: 74 TVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 133
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 134 FAVYPAPQISTAVVE 148
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 89.8 bits (213), Expect = 3e-18
Identities = 55/135 (40%), Positives = 57/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V D E VVDEV G R LF E I GKED Y G
Sbjct: 49 FNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +D VL R K C G G GGG G G LLME V GKK K E
Sbjct: 109 TVGKEMIDTVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 168
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 169 FAIYPAPQISTAVVE 183
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/49 (46%), Positives = 23/49 (46%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
M E V VG GV GN CWE E G DG M K GGG D F
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 49
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 88.2 bits (209), Expect = 8e-18
Identities = 53/135 (39%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V D E VVDEV G R LF E I GKED Y G
Sbjct: 34 FNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GK+ +++VL R K C G G GGG G G LLME V GKK K E
Sbjct: 94 TVGKQLIEIVLDRLRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 153
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 154 FAIYPAPQISTAVVE 168
Score = 87.8 bits (208), Expect = 1e-17
Identities = 52/135 (38%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V VD E V+DE+ G R LF E I GKED Y G
Sbjct: 467 FNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHY 526
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GK+ +D VL R K C G G GGG G G LL+E V GKK K E
Sbjct: 527 TVGKDHIDNVLDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLE 586
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 587 FAIYPAPQISTAVVE 601
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/47 (44%), Positives = 22/47 (46%)
Frame = +3
Query: 189 EXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
E + VG GV GN CWE E G DG M K GGG D F
Sbjct: 421 ECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 467
Score = 37.5 bits (83), Expect = 0.015
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +3
Query: 231 GNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
GN CWE E G DG M K GGG D F
Sbjct: 2 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF 34
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 82.2 bits (194), Expect = 5e-16
Identities = 49/129 (37%), Positives = 56/129 (43%)
Frame = +1
Query: 346 EXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXXXIGKEX 525
E GK V V VD E V+DEV G R L+ E I GKED Y G IGKE
Sbjct: 966 EAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEM 1025
Query: 526 VDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXEXXXXXX 705
V++V+ + K C G G GGG G G L+ E V GKK K E
Sbjct: 1026 VEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYPA 1085
Query: 706 XXXXXXVVE 732
VVE
Sbjct: 1086 PHISTAVVE 1094
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 77.4 bits (182), Expect = 2e-14
Identities = 45/110 (40%), Positives = 48/110 (43%)
Frame = +1
Query: 403 VVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXXXIGKEXVDLVLXRXXKXXXXCXGXX 582
+ DEV G R LF E I GKED Y G +GKE +DLVL R K C G
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 583 GXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXEXXXXXXXXXXXXVVE 732
G GGG G G LLME V GKK K E VVE
Sbjct: 71 GFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVE 120
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 74.5 bits (175), Expect = 1e-13
Identities = 44/107 (41%), Positives = 46/107 (42%)
Frame = +1
Query: 412 EVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXXXIGKEXVDLVLXRXXKXXXXCXGXXGXX 591
EV G R LF E I GKED Y G +GKE +DLVL R K C G G
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 592 XXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXEXXXXXXXXXXXXVVE 732
GGG G G LLME V GKK K E VVE
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVE 108
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 71.7 bits (168), Expect = 8e-13
Identities = 41/107 (38%), Positives = 45/107 (42%)
Frame = +1
Query: 412 EVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXXXIGKEXVDLVLXRXXKXXXXCXGXXGXX 591
E+ G R LF E + GKED Y G +GKE +DL L R K C G G
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 592 XXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXEXXXXXXXXXXXXVVE 732
GGG G G LLME V GKK K E VVE
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVE 108
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 66.5 bits (155), Expect = 3e-11
Identities = 50/135 (37%), Positives = 51/135 (37%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G GK V V VD E VV E I GKED Y G
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
IGK+ VD VL R K C G G GGG G G LLME V GKK K E
Sbjct: 99 TIGKQQVDQVLDRLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 158
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 159 FAVYPAPHIASAVVE 173
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/49 (44%), Positives = 23/49 (46%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
M E + VG GV GN CWE E G DG M K GGG D F
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSF 49
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/48 (47%), Positives = 25/48 (52%)
Frame = +1
Query: 412 EVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXXXIGKEXVDLVLXRXXK 555
EV G R LF E I GKED Y G +GKE +DLVL R K
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/49 (44%), Positives = 22/49 (44%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
M E V VG GV GN CWE E G DG M K GG D F
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSF 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 412 EVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXXXIGKEXVDLVLXRXXK 555
EV G R LF + I GKED Y G +GKE +DL L + K
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 35.9 bits (79), Expect = 0.046
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXM 290
M E + VG GV GN CWE E G DG M
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHM 231
Score = 34.7 bits (76), Expect = 0.11
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = +1
Query: 553 KXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXEXXXXXXXXXXXXVVE 732
K C G G GGG G G LLME V GK+ K E VVE
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 35.5 bits (78), Expect = 0.060
Identities = 21/55 (38%), Positives = 21/55 (38%)
Frame = +1
Query: 568 CXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXEXXXXXXXXXXXXVVE 732
C G G GGG G G LLME V GKK K E VVE
Sbjct: 4 CTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVE 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,504,278
Number of Sequences: 59808
Number of extensions: 30692
Number of successful extensions: 53
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2645618622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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