Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A24
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 89 3e-18
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 89 3e-18
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 89 3e-18
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 89 3e-18
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 86 3e-17
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 86 3e-17
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 86 3e-17
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 86 3e-17
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 85 9e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 85 9e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 84 1e-16
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 83 3e-16
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 81 1e-15
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 89.4 bits (212), Expect = 3e-18
Identities = 53/135 (39%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G G+ V V VD E V+DE+ G R LF E I GKED Y G
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
IGKE +DL L R + C G G GGG G G LLME V GKK K E
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 169 FSIYPAPQVSTAVVE 183
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/49 (40%), Positives = 22/49 (44%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
M E + +G GV GN CWE E G DG M K GG D F
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSF 49
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 89.4 bits (212), Expect = 3e-18
Identities = 53/135 (39%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G G+ V V VD E V+DE+ G R LF E I GKED Y G
Sbjct: 48 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 107
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
IGKE +DL L R + C G G GGG G G LLME V GKK K E
Sbjct: 108 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 167
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 168 FSIYPAPQVSTAVVE 182
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +3
Query: 189 EXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
E + +G GV GN CWE E G DG M K GG D F
Sbjct: 2 EVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSF 48
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 89.4 bits (212), Expect = 3e-18
Identities = 53/135 (39%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G G+ V V VD E V+DE+ G R LF E I GKED Y G
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
IGKE +DL L R + C G G GGG G G LLME V GKK K E
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 169 FSIYPAPQVSTAVVE 183
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/49 (40%), Positives = 22/49 (44%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
M E + +G GV GN CWE E G DG M K GG D F
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSF 49
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 89.4 bits (212), Expect = 3e-18
Identities = 53/135 (39%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F E G G+ V V VD E V+DE+ G R LF E I GKED Y G
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
IGKE +DL L R + C G G GGG G G LLME V GKK K E
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 169 FSIYPAPQVSTAVVE 183
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/49 (40%), Positives = 22/49 (44%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
M E + +G GV GN CWE E G DG M K GG D F
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSF 49
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 86.2 bits (204), Expect = 3e-17
Identities = 50/135 (37%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F + G G+ V + VD E VVDE+ G + LF E I GKED Y G
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +D VL R + C G G GGG G G LLME V GKK K E
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 167 FSIYPAPQVSTAVVE 181
Score = 35.9 bits (79), Expect = 0.040
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXM 290
M E + VG GV GN CWE E G DG M
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTM 36
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 86.2 bits (204), Expect = 3e-17
Identities = 50/135 (37%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F + G G+ V + VD E VVDE+ G + LF E I GKED Y G
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +D VL R + C G G GGG G G LLME V GKK K E
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 167 FSIYPAPQVSTAVVE 181
Score = 36.3 bits (80), Expect = 0.031
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGG 314
M E + VG GV GN CWE E G DG M + G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG 44
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 86.2 bits (204), Expect = 3e-17
Identities = 50/135 (37%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F + G G+ V + VD E VVDE+ G + LF E I GKED Y G
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +D VL R + C G G GGG G G LLME V GKK K E
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 167 FSIYPAPQVCTAVVE 181
Score = 36.3 bits (80), Expect = 0.031
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGG 314
M E + VG GV GN CWE E G DG M + G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG 44
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 86.2 bits (204), Expect = 3e-17
Identities = 50/135 (37%), Positives = 58/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F + G G+ V + VD E VVDE+ G + LF E I GKED Y G
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +D VL R + C G G GGG G G LLME V GKK K E
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 167 FSIYPAPQVSTAVVE 181
Score = 35.9 bits (79), Expect = 0.040
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXM 290
M E + VG GV GN CWE E G DG M
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTM 36
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 84.6 bits (200), Expect = 9e-17
Identities = 49/135 (36%), Positives = 57/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F + G G+ V + VD E VVDE+ G + LF E I GKED Y G
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +D L R + C G G GGG G G LLME V GKK K E
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 167 FSIYPAPQVSTAVVE 181
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGG 317
M E + VG GV GN CWE E G DG M + GG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG 45
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 84.6 bits (200), Expect = 9e-17
Identities = 49/135 (36%), Positives = 57/135 (42%)
Frame = +1
Query: 328 FXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXX 507
F + G G+ V + VD E VVDE+ G + LF E I GKED Y G
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 508 XIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+GKE +D L R + C G G GGG G G LLME V GKK K E
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 688 XXXXXXXXXXXXVVE 732
VVE
Sbjct: 167 FSIYPAPQVSTAVVE 181
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGG 317
M E + VG GV GN CWE E G DG M + GG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG 45
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 84.2 bits (199), Expect = 1e-16
Identities = 47/126 (37%), Positives = 57/126 (45%)
Frame = +1
Query: 310 GVEXIXFXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXX 489
GV+ F E GK V + VD E +DE+ G + LF E + GKED
Sbjct: 48 GVDDDSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANN 107
Query: 490 YXXGXXXIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXG 669
Y G IGKE +D+V+ R + C G G GGG G G LLME V G
Sbjct: 108 YARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYG 167
Query: 670 KKXKXE 687
KK K E
Sbjct: 168 KKSKLE 173
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 189 EXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
E + VG GV GN CWE E G DG + G D F
Sbjct: 8 EVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSF 54
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 83.0 bits (196), Expect = 3e-16
Identities = 46/114 (40%), Positives = 53/114 (46%)
Frame = +1
Query: 346 EXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXXXIGKEX 525
E GK V + VD E VVDEV G R LF E + GKED Y G IG+E
Sbjct: 61 ETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREM 120
Query: 526 VDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+D+V+ R + C G G GGG G G LLME GKK K E
Sbjct: 121 IDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLE 174
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 189 EXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDG 284
E + VG GV GN CWE E G DG
Sbjct: 9 EVISIHVGQAGVQIGNACWELFCLEHGIQPDG 40
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 83.0 bits (196), Expect = 3e-16
Identities = 47/126 (37%), Positives = 56/126 (44%)
Frame = +1
Query: 310 GVEXIXFXXXXXEXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXX 489
GVE + E GK V + VD E V+DEV G LF E I GKED
Sbjct: 43 GVEDQSYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANN 102
Query: 490 YXXGXXXIGKEXVDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXG 669
Y G IGKE +D+V+ R + C G GGG G G L+ME + G
Sbjct: 103 YARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYG 162
Query: 670 KKXKXE 687
KK K E
Sbjct: 163 KKAKLE 168
Score = 35.5 bits (78), Expect = 0.053
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXM 290
M E + +G GV GN CWE E G DG M
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLM 36
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 83.0 bits (196), Expect = 3e-16
Identities = 49/125 (39%), Positives = 55/125 (44%)
Frame = +1
Query: 358 GKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXXXIGKEXVDLV 537
GK V + VD E V+DE+ G LF + I GKED Y G IGKE +D+V
Sbjct: 62 GKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVV 121
Query: 538 LXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXEXXXXXXXXXX 717
L R K C G G GGG G G LLME V GKK K E
Sbjct: 122 LDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVS 181
Query: 718 XXVVE 732
VVE
Sbjct: 182 TSVVE 186
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 83.0 bits (196), Expect = 3e-16
Identities = 46/114 (40%), Positives = 53/114 (46%)
Frame = +1
Query: 346 EXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXXXIGKEX 525
E GK V + VD E VVDEV G R LF E + GKED Y G IG+E
Sbjct: 33 ETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREM 92
Query: 526 VDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXE 687
+D+V+ R + C G G GGG G G LLME GKK K E
Sbjct: 93 IDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLE 146
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 81.0 bits (191), Expect = 1e-15
Identities = 45/129 (34%), Positives = 55/129 (42%)
Frame = +1
Query: 346 EXGXGKXVGGXVXVDXEXXVVDEVXXGXXRXLFXXEXXIXGKEDXXXXYXXGXXXIGKEX 525
+ G G+ V + VD E VVDE+ G + LF E + GKED Y G +GKE
Sbjct: 52 DTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEI 111
Query: 526 VDLVLXRXXKXXXXCXGXXGXXXXXXXGGGXGXGXXXLLMEXXXVXXGKKXKXEXXXXXX 705
+D L R + C G G GGG G G +LME GKK K E
Sbjct: 112 IDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPA 171
Query: 706 XXXXXXVVE 732
VVE
Sbjct: 172 PQISTSVVE 180
Score = 34.7 bits (76), Expect = 0.093
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 183 MXEXXXVXVGXXGVXXGNXCWEXXXXEXGXXXDGXMXXXKXXGGGXDXF 329
M E + VG GV GN CWE E G DG G F
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSMEPDGNSGSLGTF 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,213,932
Number of Sequences: 27780
Number of extensions: 26969
Number of successful extensions: 60
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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