Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A23
         (934 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         244   4e-66
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         244   4e-66
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         244   4e-66
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          241   3e-65
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   2.5  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   2.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   4.3  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   5.7  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  244 bits (596), Expect = 4e-66
 Identities = 109/117 (93%), Positives = 112/117 (95%)
 Frame = +2

Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
            KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK  R
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117



 Score = 73.7 bits (173), Expect = 7e-15
 Identities = 36/44 (81%), Positives = 37/44 (84%)
 Frame = +3

Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
           EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL  GDGVS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 161


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  244 bits (596), Expect = 4e-66
 Identities = 109/117 (93%), Positives = 112/117 (95%)
 Frame = +2

Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
            KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK  R
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117



 Score = 73.7 bits (173), Expect = 7e-15
 Identities = 36/44 (81%), Positives = 37/44 (84%)
 Frame = +3

Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
           EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL  GDGVS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 161


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  244 bits (596), Expect = 4e-66
 Identities = 109/117 (93%), Positives = 112/117 (95%)
 Frame = +2

Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
            KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK  R
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117



 Score = 73.7 bits (173), Expect = 7e-15
 Identities = 36/44 (81%), Positives = 37/44 (84%)
 Frame = +3

Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
           EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL  GDGVS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 161


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  241 bits (589), Expect = 3e-65
 Identities = 108/117 (92%), Positives = 109/117 (93%)
 Frame = +2

Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
           MCDDD  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEA 
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
            KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK  R
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNR 117



 Score = 68.5 bits (160), Expect = 3e-13
 Identities = 33/44 (75%), Positives = 36/44 (81%)
 Frame = +3

Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
           EKM QIMFE F +P +YV IQAVLSLYASGRT G+VL  GDGVS
Sbjct: 118 EKMTQIMFETFAAPAVYVAIQAVLSLYASGRTTGVVLDSGDGVS 161


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = -2

Query: 378 RIPLLXWASSPT*ESFWPIPTI---TPWWRGRPTMDGXTARGASSPAKP 241
           R P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = -2

Query: 378 RIPLLXWASSPT*ESFWPIPTI---TPWWRGRPTMDGXTARGASSPAKP 241
           R P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 295 PSPPGRDGRYGP 330
           P P GRDG +GP
Sbjct: 346 PGPRGRDGNFGP 357


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = -2

Query: 378 RIPLLXWASSPT*ESFWPIPTI---TPWWRGRPTMDGXTARGASSPAKP 241
           + P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 131 KFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,423
Number of Sequences: 2352
Number of extensions: 9060
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)