Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A23
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 247 1e-65
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 245 3e-65
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 245 3e-65
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 245 3e-65
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 245 3e-65
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 245 3e-65
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 245 3e-65
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 245 3e-65
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 235 2e-62
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 206 2e-53
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 184 8e-47
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 182 2e-46
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 182 2e-46
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 178 4e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 152 4e-37
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 132 3e-31
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 82 5e-16
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 46 4e-05
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 4.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 247 bits (604), Expect = 1e-65
Identities = 111/117 (94%), Positives = 112/117 (95%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 72.5 bits (170), Expect = 4e-13
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL GDGV+
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 245 bits (600), Expect = 3e-65
Identities = 110/117 (94%), Positives = 112/117 (95%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT G+VL GDGV+
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 245 bits (600), Expect = 3e-65
Identities = 110/117 (94%), Positives = 112/117 (95%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT G+VL GDGV+
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 245 bits (600), Expect = 3e-65
Identities = 110/117 (94%), Positives = 112/117 (95%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT G+VL GDGV+
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 245 bits (600), Expect = 3e-65
Identities = 110/117 (94%), Positives = 112/117 (95%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT G+VL GDGV+
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 245 bits (600), Expect = 3e-65
Identities = 109/117 (93%), Positives = 112/117 (95%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 72.5 bits (170), Expect = 4e-13
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL GDGV+
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 245 bits (600), Expect = 3e-65
Identities = 110/117 (94%), Positives = 112/117 (95%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT G+VL GDGV+
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 245 bits (600), Expect = 3e-65
Identities = 110/117 (94%), Positives = 112/117 (95%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT G+VL GDGV+
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 235 bits (576), Expect = 2e-62
Identities = 104/115 (90%), Positives = 110/115 (95%)
Frame = +2
Query: 188 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXK 367
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 368 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPL PK R
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNR 116
Score = 72.5 bits (170), Expect = 4e-13
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL GDGV+
Sbjct: 117 EKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVT 160
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 206 bits (503), Expect = 2e-53
Identities = 92/99 (92%), Positives = 94/99 (94%)
Frame = +2
Query: 236 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKRGILTLKYPIEHGIIT 415
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA KRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 416 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 103
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT G+VL GDGV+
Sbjct: 104 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 147
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 184 bits (448), Expect = 8e-47
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKI 439
KRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 182 bits (444), Expect = 2e-46
Identities = 82/86 (95%), Positives = 84/86 (97%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKI 439
KRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 182 bits (444), Expect = 2e-46
Identities = 82/86 (95%), Positives = 84/86 (97%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDMEKI 439
KRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 178 bits (434), Expect = 4e-45
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 361
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 362 XKRGILTLKYPIEHGIITNWDDM 430
KRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 152 bits (368), Expect = 4e-37
Identities = 67/73 (91%), Positives = 68/73 (93%)
Frame = +2
Query: 314 MVGMGQKDSYVGDEAHXKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 493
MVGMGQKDSYVGDEA KRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 494 LLTEAPLXPKXXR 532
LLTEAPL PK R
Sbjct: 61 LLTEAPLNPKANR 73
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT G+VL GDGV+
Sbjct: 74 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 117
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 132 bits (319), Expect = 3e-31
Identities = 60/119 (50%), Positives = 83/119 (69%), Gaps = 4/119 (3%)
Frame = +2
Query: 188 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 358
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 359 HXKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLXPKXXR 532
RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APL P R
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNR 120
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
E+ +I FE FN P +Y+ +QAVLSLYA+GRT G+VL GDGV+
Sbjct: 121 ERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVT 164
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 102 bits (245), Expect = 3e-22
Identities = 52/112 (46%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
Frame = +2
Query: 206 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAHXKRGIL 379
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 380 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLXPKXXR 532
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PL P R
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNR 120
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM Q+MFE + +YV +QAVL+LYA G G+V+ GDGV+
Sbjct: 121 EKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVT 164
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 82.2 bits (194), Expect = 5e-16
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Frame = +2
Query: 182 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 325
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 326 GQKDSYVGDEAHXKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 502
D ++GDEA T+KYPI HGI+ +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 503 EAPL 514
E PL
Sbjct: 121 EPPL 124
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 8/52 (15%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRT--------XGIVLXXGDGVS 665
E +IMFE FN P +Y+ +QAVL+L AS + G+V+ GDGV+
Sbjct: 131 EYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVT 182
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 48.4 bits (110), Expect = 7e-06
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP---------RHQGVMVGMG----- 328
D+V+ LV D GS + GFAG++ P+ PS + + + + G
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 329 --QKDSYVGD-EAHXKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 499
+K+ ++G + R ++ ++ G+I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 500 TEA 508
+E+
Sbjct: 129 SES 131
Score = 41.5 bits (93), Expect = 8e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 522 RXXGEKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXG 653
R EK+ +IMFE F P Y+ VLS +A GRT G+++ G
Sbjct: 136 RARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +2
Query: 197 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKRGI 376
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 377 LTLKYPIEHGIITNWDDMEKIWHHTF 454
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +2
Query: 197 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKRGI 376
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 377 LTLKYPIEHGIITNWDDMEKIWHHTF 454
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 327 PIPTITPWWRGRPTMDGXTARGASSPAKPALHMPEPL 217
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,775,510
Number of Sequences: 27780
Number of extensions: 198215
Number of successful extensions: 711
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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