Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A23
(934 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 220 9e-58
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 220 9e-58
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 220 1e-57
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 220 1e-57
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 219 2e-57
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 219 2e-57
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 218 5e-57
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 218 5e-57
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 218 5e-57
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 208 5e-54
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 160 1e-39
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 127 9e-30
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 115 4e-26
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 97 1e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 88 7e-18
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 81 8e-16
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 62 7e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 50 2e-06
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 44 2e-04
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 31 1.1
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 31 1.1
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 220 bits (538), Expect = 9e-58
Identities = 98/114 (85%), Positives = 104/114 (91%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKR 370
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 371 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 72.5 bits (170), Expect = 4e-13
Identities = 36/44 (81%), Positives = 36/44 (81%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN P MYV IQAVLSLYASGRT GIVL GDGVS
Sbjct: 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 220 bits (538), Expect = 9e-58
Identities = 98/114 (85%), Positives = 104/114 (91%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKR 370
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 371 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL GDGVS
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 220 bits (537), Expect = 1e-57
Identities = 98/114 (85%), Positives = 103/114 (90%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKR 370
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 371 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL GDGVS
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 220 bits (537), Expect = 1e-57
Identities = 98/114 (85%), Positives = 103/114 (90%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKR 370
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 371 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PK R
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL GDGVS
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 219 bits (536), Expect = 2e-57
Identities = 97/114 (85%), Positives = 103/114 (90%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKR 370
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 371 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPL PK R
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL GDGVS
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 219 bits (536), Expect = 2e-57
Identities = 97/114 (85%), Positives = 103/114 (90%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKR 370
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 371 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPL PK R
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118
Score = 73.7 bits (173), Expect = 2e-13
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FN+P MYV IQAVLSLYASGRT GIVL GDGVS
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 218 bits (532), Expect = 5e-57
Identities = 94/114 (82%), Positives = 103/114 (90%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKR 370
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA KR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 371 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPL PK R
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Score = 74.9 bits (176), Expect = 7e-14
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FNSP MYV IQAVLSLYASGRT GIVL GDGVS
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 218 bits (532), Expect = 5e-57
Identities = 94/114 (82%), Positives = 103/114 (90%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKR 370
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA KR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 371 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPL PK R
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Score = 74.9 bits (176), Expect = 7e-14
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FNSP MYV IQAVLSLYASGRT GIVL GDGVS
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 218 bits (532), Expect = 5e-57
Identities = 94/114 (82%), Positives = 103/114 (90%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKR 370
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA KR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 371 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPL PK R
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Score = 74.9 bits (176), Expect = 7e-14
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE FNSP MYV IQAVLSLYASGRT GIVL GDGVS
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 208 bits (507), Expect = 5e-54
Identities = 88/114 (77%), Positives = 103/114 (90%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKR 370
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEA +R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 371 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
GIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPL PK R
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNR 119
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/44 (75%), Positives = 35/44 (79%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE F P MY+ IQAVLSLY+SGRT GIVL GDGVS
Sbjct: 120 EKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVS 163
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 160 bits (388), Expect = 1e-39
Identities = 72/109 (66%), Positives = 83/109 (76%)
Frame = +2
Query: 206 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKRGILTL 385
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E H R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 386 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
K P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP PK R
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANR 107
Score = 59.3 bits (137), Expect = 4e-09
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE F+ P MYV +Q+VL LY+SGRT G+VL G+ VS
Sbjct: 108 EKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVS 151
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 127 bits (307), Expect = 9e-30
Identities = 53/73 (72%), Positives = 63/73 (86%)
Frame = +2
Query: 314 MVGMGQKDSYVGDEAHXKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 493
MVGM + D +VGD+A + GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 494 LLTEAPLXPKXXR 532
LLTEAPL PK R
Sbjct: 61 LLTEAPLNPKADR 73
Score = 62.1 bits (144), Expect = 5e-10
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM QIMFE F P MY+ +QA LSL+ASGRT G VL GDGVS
Sbjct: 74 EKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVS 117
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 115 bits (277), Expect = 4e-26
Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAHX 364
D+ +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 365 KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLXPKXXR 532
R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PL P R
Sbjct: 62 LRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNR 117
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDGVS 665
EKM + MFE +N +++ IQAVL+LYA G G+V+ GDGV+
Sbjct: 118 EKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVT 161
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 97.5 bits (232), Expect = 1e-20
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 16/130 (12%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 325
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 326 GQKDSYVGDEA-HXKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 502
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 503 EAPLXPKXXR 532
E PL + R
Sbjct: 125 EPPLNSQQQR 134
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 88.2 bits (209), Expect = 7e-18
Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 22/136 (16%)
Frame = +2
Query: 191 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 340
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 341 -----------YVGDEA-HXKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEE 484
YVG +A +R + + PI+ GI+++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 485 HPVLLTEAPLXPKXXR 532
HP+LL E PL + R
Sbjct: 125 HPMLLAEPPLNTQQQR 140
Score = 34.7 bits (76), Expect = 0.089
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDG 659
EK ++MFE + P +++ VL+ +A+GR +V+ G G
Sbjct: 141 EKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGG 182
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 81.4 bits (192), Expect = 8e-16
Identities = 52/131 (39%), Positives = 69/131 (52%), Gaps = 21/131 (16%)
Frame = +2
Query: 203 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 328
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 329 QKDSYVGDEAHXK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 499
D Y+GDEA K R T L YPIEHG + +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 500 TEAPLXPKXXR 532
TE+PL P R
Sbjct: 125 TESPLTPPESR 135
Score = 35.1 bits (77), Expect = 0.067
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRT-----XGIVLXXGDGVS 665
E +I+FE FN P +Y+ + +VL+L A T G+V+ GDG +
Sbjct: 136 EYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGAT 184
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 61.7 bits (143), Expect = 7e-10
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +2
Query: 206 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKRGILTL 385
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 386 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL-XPKXXRGED 541
+ PI+ G + N D +IW H F + L +AP +LLTEAPL P R D
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTD 114
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +2
Query: 206 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG--DEAHXKRGIL 379
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VG D + K
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 380 TL---KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLXPKXXRGE 538
T + P + ++ ++ ME I + F + +HP+L+TE P R +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSK 134
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +3
Query: 534 EKMXQIMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXGDG 659
E++ Q+MFE FN Y QAVLSLYA GR G + G G
Sbjct: 105 EQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHG 146
Score = 41.1 bits (92), Expect = 0.001
Identities = 39/112 (34%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = +2
Query: 203 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHXKRGIL 379
ALVVD GS KAG A D +P + PS + R MV G + D +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 380 TLKYPIEHGIITNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLXPKXXR 532
TL PIE G+I +WD ME + + Y L E +L T+ PK R
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIR 104
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 549 IMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXG 653
++F+ N P + QAVL+LYA+ RT GIV+ G
Sbjct: 225 VLFD-MNVPAVCAVNQAVLALYAARRTSGIVVNIG 258
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 549 IMFEXFNSPXMYVXIQAVLSLYASGRTXGIVLXXG 653
++F+ N P + QAVL+LYA+ RT GIV+ G
Sbjct: 225 VLFD-MNVPAVCAVNQAVLALYAARRTSGIVVNIG 258
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,481,432
Number of Sequences: 28952
Number of extensions: 190851
Number of successful extensions: 485
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2227127592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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