Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A22
         (872 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0144 + 26258841-26258948,26259099-26259212,26259335-262595...    84   2e-16
03_06_0282 - 32824950-32825135,32825247-32825505,32825651-328259...    83   3e-16
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093...    82   7e-16
01_05_0337 + 21115388-21115961,21116471-21116597,21116683-211168...    46   4e-05
02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,369...    28   8.5  

>02_05_0144 +
           26258841-26258948,26259099-26259212,26259335-26259556,
           26259660-26259734,26259827-26259943,26260046-26260296,
           26260833-26260908,26261045-26261131,26261216-26261401
          Length = 411

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 40/73 (54%), Positives = 48/73 (65%)
 Frame = +2

Query: 581 GYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKEY 760
           G+R QH   R P KGGIR+  +V  DEV AL+ LMT+K A   VP+GGAK GI   P E 
Sbjct: 53  GFRVQHDNSRGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAVPYGGAKGGIGCTPGEL 112

Query: 761 SEHELEKITRRFT 799
           S  ELE++TR FT
Sbjct: 113 SRSELERLTRVFT 125


>03_06_0282 -
           32824950-32825135,32825247-32825505,32825651-32825901,
           32826309-32826425,32826613-32826687,32826788-32827009,
           32827396-32827509,32827694-32827801
          Length = 443

 Score = 83.0 bits (196), Expect = 3e-16
 Identities = 39/75 (52%), Positives = 51/75 (68%)
 Frame = +2

Query: 575 Y*GYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCACVDVPFGGAKAGIKINPK 754
           Y G+R QH   R P KGGIR+  +V  DEV AL+ LMT+K A  ++P+GGAK GI  +P 
Sbjct: 51  YVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPG 110

Query: 755 EYSEHELEKITRRFT 799
           + S  ELE++TR FT
Sbjct: 111 DLSISELERLTRVFT 125


>04_04_0678 +
           27207340-27207447,27207555-27207668,27209111-27209332,
           27209407-27209481,27209569-27209685,27210145-27210395,
           27210686-27210761,27210862-27210948,27211037-27211222
          Length = 411

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 39/73 (53%), Positives = 48/73 (65%)
 Frame = +2

Query: 581 GYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKEY 760
           G+R QH   R P KGGIR+  +V  DEV AL+ LMT+K A   +P+GGAK GI   P E 
Sbjct: 53  GFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCAPGEL 112

Query: 761 SEHELEKITRRFT 799
           S  ELE++TR FT
Sbjct: 113 STSELERLTRVFT 125


>01_05_0337 +
           21115388-21115961,21116471-21116597,21116683-21116884,
           21117460-21117546,21117622-21117681,21117800-21117886,
           21118451-21118522,21118675-21118730,21118812-21118897,
           21119427-21119517,21119593-21119750,21119827-21119918,
           21120110-21120190,21120282-21120479
          Length = 656

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 25/72 (34%), Positives = 34/72 (47%)
 Frame = +2

Query: 581 GYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKEY 760
           G+R Q S    P +GG+RF   +T    K L+   T K A      GGA  G   +PK  
Sbjct: 267 GFRVQFSQALGPCRGGLRFHPSMTLSVAKFLAFEQTLKNALSQYKLGGAAGGSDFDPKGK 326

Query: 761 SEHELEKITRRF 796
           SE E+ +  + F
Sbjct: 327 SESEIMRFCQSF 338


>02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,
            3697214-3698062,3698193-3698337,3698426-3698677,
            3698780-3699089,3699415-3699524
          Length = 962

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 20/77 (25%), Positives = 36/77 (46%)
 Frame = +1

Query: 382  HMVEYFFHRACQVVEDKLVEDLKSRTPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSG 561
            H    F   AC ++  KLV+ L     +EE+      +L L+      LE  +PL++D+ 
Sbjct: 882  HGCNTFQPLACSILATKLVDSLSYDRVLEERVLASLSLLNLVRH-PECLEKLYPLKKDT- 939

Query: 562  DYEMILGLSRTTFHTQD 612
              E +  L+  T+  ++
Sbjct: 940  -VESLQDLAEVTWTAKE 955


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,319,707
Number of Sequences: 37544
Number of extensions: 480150
Number of successful extensions: 1068
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)