Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A21
         (1134 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    36   0.003
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    35   0.004
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    29   0.33 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   7.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 35.5 bits (78), Expect = 0.003
 Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -2

Query: 944 GGGEFXSGRXGXXGRGGRXXAR---XGRGGXRVXGGXGXGARG 825
           GGG+   G  G  GRGGR   R    GRGG    GG G G  G
Sbjct: 58  GGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYG 100



 Score = 27.5 bits (58), Expect = 0.77
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = -2

Query: 941 GGEFXSGRXGXXGRGGRXXARXGRGGXRVXGGXGXGARGQXG 816
           G E+ S   G  G G       GRGG    GG     RG+ G
Sbjct: 46  GDEYQSNDNGGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGG 87


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 35.1 bits (77), Expect = 0.004
 Identities = 24/82 (29%), Positives = 26/82 (31%)
 Frame = -2

Query: 1070 GGGXXXGXRVAGVWXXGXXXXXR*GEXXXXGGWXGXAXAXXXGGGEFXSGRXGXXGRGGR 891
            GGG   G   A +         +  E    GG  G       GG     G  G  G GGR
Sbjct: 174  GGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGR 233

Query: 890  XXARXGRGGXRVXGGXGXGARG 825
                  R   R  GG G G  G
Sbjct: 234  DRDHRDRDREREGGGNGGGGGG 255


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 28.7 bits (61), Expect = 0.33
 Identities = 17/59 (28%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
 Frame = +1

Query: 826 PRAPXPXPPXTLX-PPRPXLAXXRPPRPXXPXRPLXNSPPPXXXAXAXPXHPPXXXXSP 999
           P+     PP T+  PPRP +    P  P     P    PPP       P   P     P
Sbjct: 72  PKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPP 130


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 14/59 (23%), Positives = 19/59 (32%)
 Frame = +1

Query: 895  PPRPXXPXRPLXNSPPPXXXAXAXPXHPPXXXXSPHRXXXXLPXXHTPATRXPXXXPPP 1071
            PP P  P   + N PP            P    +P +        + P  + P   PPP
Sbjct: 530  PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPP 588



 Score = 23.8 bits (49), Expect = 9.5
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +1

Query: 835 PXPXPPXTLXPPRPXLAXXRPPRPXXPXRPLXN 933
           P P PP  + PP   LA      P     PL N
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPN 615


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 1.8
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = -3

Query: 979 GGGXG*RGXXXXGAGNX*VXXAXXXGGXXGCXRGXAGGA*GXXGG 845
           GGG G  G      G+         GG  G  RG +GGA G   G
Sbjct: 817 GGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSG 861


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 7.2
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +1

Query: 826 PRAPXPXPPXTLXPPRPXLAXXRPPRPXXPXRP 924
           PR   P  P    PPRP     +PP    P RP
Sbjct: 201 PRTGTPTQPQ---PPRPGGMYPQPPGVPMPMRP 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,356
Number of Sequences: 2352
Number of extensions: 4962
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 127120317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)