Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A19
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0214 + 21616019-21616086,21616205-21616252,21616336-216164...   169   2e-42
02_01_0127 - 926333-926359,926637-926708,926928-927032,927129-92...    95   6e-20
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896...    79   4e-15
07_01_0026 + 190568-190829,192475-194534,194620-195168                 28   8.1  
01_01_0145 + 1327172-1327362,1327491-1328169                           28   8.1  

>09_06_0214 +
           21616019-21616086,21616205-21616252,21616336-21616427,
           21616555-21616645,21617660-21617720,21617810-21617887,
           21617979-21618029,21618118-21618191,21618306-21618378,
           21618762-21618819,21618899-21618969,21619045-21619110,
           21619327-21619359,21619445-21619497,21619572-21619647,
           21619729-21619785,21619874-21619957,21620037-21620135,
           21620260-21620364,21620575-21620643,21621019-21621108
          Length = 498

 Score =  169 bits (412), Expect = 2e-42
 Identities = 81/146 (55%), Positives = 102/146 (69%), Gaps = 2/146 (1%)
 Frame = +2

Query: 311 EKEFKGFKTLFXRFLAEQGPSVTWEKIEKLPEGAVIDYNSLSTPTTD--NVHHMLDKLVV 484
           E E  GF +L  R+L+ +   + W KI+   +  V+ Y++LS    D      +LDKLVV
Sbjct: 24  ENEKSGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLSAAPEDLNETKKLLDKLVV 83

Query: 485 VKLNGGLGTSMGCKGPKSVIQVRNDLTFLDLTVQQIEHLNKTYKCNVPLVLMNSFNTDED 664
           +KLNGGLGT+MGC GPKSVI+VRN  TFLDL V QIE LNK Y CNVPL+LMNSFNT +D
Sbjct: 84  LKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCNVPLLLMNSFNTHDD 143

Query: 665 TQKVIRXYKGLKLDIHTFNQSCHPRI 742
           TQK++  Y    ++IHTFNQS +PRI
Sbjct: 144 TQKIVEKYSNSNIEIHTFNQSQYPRI 169


>02_01_0127 -
           926333-926359,926637-926708,926928-927032,927129-927227,
           927298-927381,927462-927518,927596-927671,927755-927807,
           927899-927931,928100-928165,928556-928628,928721-928794,
           929177-929237,929354-929536,929656-929703,929810-929868
          Length = 389

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +2

Query: 311 EKEFKGFKTLFXRFLAEQGPSVTWEKIEKLPEGAVIDYNSLSTPTTD--NVHHMLDKLVV 484
           + E  GF +L  R+L+ +   V W KI    +  V+ Y++L+ P  D      +L+KL V
Sbjct: 21  DNEKSGFISLVARYLSGEEEHVEWAKIHTPTDEVVVPYDTLAAPPEDLEETKKLLNKLAV 80

Query: 485 VKLNGGLGTSMGCKGPKSVIQVRNDLTFLDLTVQQIE 595
           +KLNGGLGT+MGC GPKSVI+VRN  TFLDL V QIE
Sbjct: 81  LKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIE 117


>01_01_1130 +
           8959909-8960396,8960588-8960638,8960736-8960827,
           8960964-8961054,8961877-8961937,8962172-8962216,
           8962318-8962391,8962565-8962637,8963288-8963345,
           8963398-8963468,8963801-8963837,8964040-8964128,
           8964207-8964263,8964366-8964449,8964529-8964627,
           8964765-8964869,8965145-8965216,8965308-8965497,
           8965810-8966207
          Length = 744

 Score = 79.0 bits (186), Expect = 4e-15
 Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = +2

Query: 311 EKEFKGFKTLFXRFLA-EQGPSVTWEKIEKLPEGAVIDYNSLSTPTTD--NVHHMLDKLV 481
           +++   F  L  R+L  E+   + W K+E+     V+ Y+SL     D   + ++L+KL 
Sbjct: 164 DEDKDSFMHLVSRYLIREEKEMIDWNKVERPTPEMVVPYDSLVQAPRDIPEIRNLLNKLA 223

Query: 482 VVKLNGGLGTSMGCKGPKSVIQVRNDLTFLDLTVQQIEHLNK 607
           V+KLNGGLGT+M C  PK  I+VR+ LTFLDL + Q E + K
Sbjct: 224 VLKLNGGLGTTMECVAPKCTIEVRSGLTFLDLAIMQTEIVEK 265


>07_01_0026 + 190568-190829,192475-194534,194620-195168
          Length = 956

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 738 VSTGESLLPIAXNGDVQDDIESWLSPG 818
           V    ++L ++ NGD+Q   + WLSPG
Sbjct: 784 VDLSTAILTLSENGDLQRIHDKWLSPG 810


>01_01_0145 + 1327172-1327362,1327491-1328169
          Length = 289

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -1

Query: 514 GCTQASVKLHHHQLVEHMVDVVCRW---RGQTVVIDYSSFWKLLDFLPCHRG 368
           GCT   + L++H L EH  D V      RG TV +  S  + +L     HRG
Sbjct: 144 GCTYLGLLLYNHILDEHATDAVVAMGSLRGTTVTVHKSKPFNVL----LHRG 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,308,379
Number of Sequences: 37544
Number of extensions: 560422
Number of successful extensions: 1678
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)