Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A19
         (841 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   1.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   2.7  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   8.1  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +1

Query: 640 ELLQHG*RHPEGDQXV*GSEAGHPH-LQSVLPPSYQQGSHCCPSL 771
           +L   G  HP   Q   G+    P   QSV   S Q G  C PSL
Sbjct: 12  DLRNGGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQAGDPCDPSL 56


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 563 SGHSGLGSRIWGPYSPWMY 507
           SG +G G R+  PY  W +
Sbjct: 95  SGKTGKGGRLLKPYPDWSF 113


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 620 NVPLVLMNSFNTDEDTQKVIR 682
           NVP  L   FN   DT  VI+
Sbjct: 220 NVPYFLFGDFNFRTDTAGVIK 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,059
Number of Sequences: 438
Number of extensions: 4900
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)