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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A17
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0317 - 16328558-16328612,16328698-16328901,16329794-163300...   155   4e-38
01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419          155   4e-38
07_03_0100 + 13389899-13390219,13390723-13390841,13391220-133913...    32   0.70 
11_02_0083 - 8116997-8117590,8118342-8118745,8119073-8119671,812...    30   2.1  
02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497...    29   4.9  
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542...    29   6.5  
02_04_0259 - 21345100-21345891,21347081-21347516,21347602-21348161     28   8.6  
01_01_0115 - 856957-858055,858479-858538,858802-859583                 28   8.6  

>11_04_0317 -
           16328558-16328612,16328698-16328901,16329794-16330065,
           16330152-16330220
          Length = 199

 Score =  155 bits (376), Expect = 4e-38
 Identities = 76/92 (82%), Positives = 83/92 (90%)
 Frame = +3

Query: 486 QVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNIKTI 665
           QV+V AIINSGPRED+TRIG AG VRR AVD+SPLRRVNQAI+LL TGARE+AF NIKTI
Sbjct: 105 QVIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 164

Query: 666 AECVADXXINAAKGXSNSYAIKKKDELERVAK 761
           AEC+AD  INAAKG SNSYAIKKKDE+ERVAK
Sbjct: 165 AECLADELINAAKGSSNSYAIKKKDEIERVAK 196



 Score =  140 bits (339), Expect = 1e-33
 Identities = 67/95 (70%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
 Frame = +2

Query: 203 EIKLFGXWSCYXVXVSDMSLQXYISVKXX-YAKYLPHSAGRYAHKRFRKAQCPIVERLTN 379
           E+KLF  WS   V V+D+SL  Y++V    +A YLPH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 10  EVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFRKAQCPIVERLTN 69

Query: 380 SLMMHGRNNGKKLMAVRIVKXAFEIIHLLTGXNPL 484
           SLMMHGRNNGKK+MAVRIVK A EIIHLLT  NP+
Sbjct: 70  SLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPI 104


>01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419
          Length = 200

 Score =  155 bits (376), Expect = 4e-38
 Identities = 76/92 (82%), Positives = 83/92 (90%)
 Frame = +3

Query: 486 QVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNIKTI 665
           QV+V AIINSGPRED+TRIG AG VRR AVD+SPLRRVNQAI+LL TGARE+AF NIKTI
Sbjct: 106 QVIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTI 165

Query: 666 AECVADXXINAAKGXSNSYAIKKKDELERVAK 761
           AEC+AD  INAAKG SNSYAIKKKDE+ERVAK
Sbjct: 166 AECLADELINAAKGSSNSYAIKKKDEIERVAK 197



 Score =  137 bits (332), Expect = 1e-32
 Identities = 65/94 (69%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
 Frame = +2

Query: 206 IKLFGXWSCYXVXVSDMSLQXYISVKXX-YAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 382
           +KLF  WS   V V+D+SL  Y++V    +A YLPH+AGRY+ KRFRKAQCP+VERLTNS
Sbjct: 12  VKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERLTNS 71

Query: 383 LMMHGRNNGKKLMAVRIVKXAFEIIHLLTGXNPL 484
           LMMHGRNNGKK+MAVRIVK A EIIHLLT  NP+
Sbjct: 72  LMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPI 105


>07_03_0100 +
           13389899-13390219,13390723-13390841,13391220-13391315,
           13391481-13391553,13392055-13392123
          Length = 225

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -3

Query: 646 NAASRAPVHKSQIAWLTRRKGETSTAXRRTVPARPILVESSRGPE 512
           +A+SR P  + +I    RR+G + +  RR+ P +P     +R PE
Sbjct: 50  HASSRVPAARHRIVCPCRRRGGSPSLTRRSSPEKPGPFSQTRSPE 94


>11_02_0083 -
           8116997-8117590,8118342-8118745,8119073-8119671,
           8120226-8120266
          Length = 545

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +3

Query: 609 IWLLCTGAREAAFXNIKTIAECVADXXINAAKGXSNSYAIKK-KDELERVAKIXPLKYTI 785
           IW LC G+  A   N   ++  +      AA      +A K+  DEL R  K     YT 
Sbjct: 333 IWQLCLGSERAKTLNWNEVSMLMTKADPEAATTLHRQFARKRLTDELARNVKSLTQTYTS 392

Query: 786 KSSL 797
            +SL
Sbjct: 393 NTSL 396


>02_03_0390 + 18448671-18448889,18449567-18449632,18449702-18449761,
            18449864-18449959,18452287-18452447,18452669-18452790,
            18452872-18453239,18453653-18453739,18453835-18453969,
            18454349-18454471,18454771-18454854,18455023-18455187,
            18455310-18455486,18455660-18455773,18455912-18456016,
            18457056-18457174,18457244-18457385,18457461-18457555,
            18457757-18457862,18458125-18458204,18458285-18458461,
            18459828-18459912,18460024-18460104,18460208-18460351,
            18460468-18460563,18460654-18460854,18461462-18461895,
            18462417-18462478,18462622-18462872,18462956-18463030,
            18463110-18463300,18463696-18463867,18463956-18464020,
            18464646-18464778,18464861-18464962,18465047-18465130,
            18465656-18465730,18465818-18465877,18465967-18466223,
            18466560-18466608,18466781-18466941,18467013-18467079,
            18467174-18467299,18467422-18467592,18468566-18468769,
            18469059-18469165,18469608-18469737,18469774-18469959,
            18470704-18470742
          Length = 2202

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 385  NDARSEQWQKTDGRTYCQTCV*NYSLVNWRXPSGKYS*LPLSTLD 519
            N+ ++  WQ T GRT  Q C  +    N R    +Y+ +PL   +
Sbjct: 1594 NNYQALGWQATAGRTSMQRCAASTQWFNERISLARYAHVPLGNFE 1638


>01_01_0703 -
           5425713-5425862,5426302-5426451,5426853-5426964,
           5427120-5427481,5427578-5427712,5427812-5427889,
           5427989-5428174,5428266-5428452,5428552-5428658,
           5428732-5428806,5428885-5429040,5429165-5429437,
           5429548-5429643,5429724-5429814,5429883-5430385
          Length = 886

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -3

Query: 616 SQIAWLTRRKGETSTAXRRTVPARPILVESSRGPELIMAVTSTCQRVXSS 467
           SQ+ +   R G  +    R VPA P    ++ G +L  A  ++C+ V +S
Sbjct: 96  SQLVYDHGRHGVAAAGMMRRVPAFPPQAAAAAGHQLATATDTSCESVVTS 145


>02_04_0259 - 21345100-21345891,21347081-21347516,21347602-21348161
          Length = 595

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 498 SRVLARGXSPVNK*IISNAXLTIRTAISFLPLFRPC 391
           +RVL RG SP+    + +    +  AI++LPL+R C
Sbjct: 512 TRVLRRGASPIR---LHDLPEPMALAIAYLPLYRAC 544


>01_01_0115 - 856957-858055,858479-858538,858802-859583
          Length = 646

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +2

Query: 257 SLQXYISVKXXYAKYLPHSAGRY 325
           +LQ ++SV+  +A  +PH+AGR+
Sbjct: 12  ALQVFVSVQFVFAVLVPHAAGRH 34


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,233,146
Number of Sequences: 37544
Number of extensions: 318375
Number of successful extensions: 575
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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