Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A17
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 172 2e-42
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 172 2e-42
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 172 2e-42
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 172 2e-42
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 169 9e-42
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 99 2e-20
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 85 3e-16
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.60
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 5.6
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 5.6
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 5.6
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 172 bits (418), Expect = 2e-42
Identities = 85/92 (92%), Positives = 86/92 (93%)
Frame = +3
Query: 486 QVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNIKTI 665
QVLV AIINSGPREDSTRIGRAGTVRR AVDVSPLRRVNQAIWLLCTGAREAAF NIKTI
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI 169
Query: 666 AECVADXXINAAKGXSNSYAIKKKDELERVAK 761
AEC+AD INAAKG SNSYAIKKKDELERVAK
Sbjct: 170 AECLADELINAAKGSSNSYAIKKKDELERVAK 201
Score = 165 bits (401), Expect = 2e-40
Identities = 77/101 (76%), Positives = 84/101 (83%)
Frame = +2
Query: 182 PQAADIPEIKLFGXWSCYXVXVSDMSLQXYISVKXXYAKYLPHSAGRYAHKRFRKAQCPI 361
P A+ P+IKLFG WS V ++D+SLQ YI+VK YAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 362 VERLTNSLMMHGRNNGKKLMAVRIVKXAFEIIHLLTGXNPL 484
VERLTNS+MMHGRNNGKKLM VRIVK AFEIIHLLTG NPL
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 172 bits (418), Expect = 2e-42
Identities = 85/92 (92%), Positives = 86/92 (93%)
Frame = +3
Query: 486 QVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNIKTI 665
QVLV AIINSGPREDSTRIGRAGTVRR AVDVSPLRRVNQAIWLLCTGAREAAF NIKTI
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI 169
Query: 666 AECVADXXINAAKGXSNSYAIKKKDELERVAK 761
AEC+AD INAAKG SNSYAIKKKDELERVAK
Sbjct: 170 AECLADELINAAKGSSNSYAIKKKDELERVAK 201
Score = 169 bits (412), Expect = 9e-42
Identities = 79/101 (78%), Positives = 86/101 (85%)
Frame = +2
Query: 182 PQAADIPEIKLFGXWSCYXVXVSDMSLQXYISVKXXYAKYLPHSAGRYAHKRFRKAQCPI 361
P A+ P+IKLFG WS V ++D+SLQ YI+VK YAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 362 VERLTNSLMMHGRNNGKKLMAVRIVKXAFEIIHLLTGXNPL 484
VERLTNS+MMHGRNNGKKLM VRIVK AFEIIHLLTG NPL
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 172 bits (418), Expect = 2e-42
Identities = 85/92 (92%), Positives = 86/92 (93%)
Frame = +3
Query: 486 QVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNIKTI 665
QVLV AIINSGPREDSTRIGRAGTVRR AVDVSPLRRVNQAIWLLCTGAREAAF NIKTI
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI 169
Query: 666 AECVADXXINAAKGXSNSYAIKKKDELERVAK 761
AEC+AD INAAKG SNSYAIKKKDELERVAK
Sbjct: 170 AECLADELINAAKGSSNSYAIKKKDELERVAK 201
Score = 169 bits (412), Expect = 9e-42
Identities = 79/101 (78%), Positives = 86/101 (85%)
Frame = +2
Query: 182 PQAADIPEIKLFGXWSCYXVXVSDMSLQXYISVKXXYAKYLPHSAGRYAHKRFRKAQCPI 361
P A+ P+IKLFG WS V ++D+SLQ YI+VK YAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 362 VERLTNSLMMHGRNNGKKLMAVRIVKXAFEIIHLLTGXNPL 484
VERLTNS+MMHGRNNGKKLM VRIVK AFEIIHLLTG NPL
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 172 bits (418), Expect = 2e-42
Identities = 85/92 (92%), Positives = 86/92 (93%)
Frame = +3
Query: 486 QVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNIKTI 665
QVLV AIINSGPREDSTRIGRAGTVRR AVDVSPLRRVNQAIWLLCTGAREAAF NIKTI
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI 169
Query: 666 AECVADXXINAAKGXSNSYAIKKKDELERVAK 761
AEC+AD INAAKG SNSYAIKKKDELERVAK
Sbjct: 170 AECLADELINAAKGSSNSYAIKKKDELERVAK 201
Score = 169 bits (412), Expect = 9e-42
Identities = 79/101 (78%), Positives = 86/101 (85%)
Frame = +2
Query: 182 PQAADIPEIKLFGXWSCYXVXVSDMSLQXYISVKXXYAKYLPHSAGRYAHKRFRKAQCPI 361
P A+ P+IKLFG WS V ++D+SLQ YI+VK YAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 362 VERLTNSLMMHGRNNGKKLMAVRIVKXAFEIIHLLTGXNPL 484
VERLTNS+MMHGRNNGKKLM VRIVK AFEIIHLLTG NPL
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 169 bits (412), Expect = 9e-42
Identities = 79/101 (78%), Positives = 86/101 (85%)
Frame = +2
Query: 182 PQAADIPEIKLFGXWSCYXVXVSDMSLQXYISVKXXYAKYLPHSAGRYAHKRFRKAQCPI 361
P A+ P+IKLFG WS V ++D+SLQ YI+VK YAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 362 VERLTNSLMMHGRNNGKKLMAVRIVKXAFEIIHLLTGXNPL 484
VERLTNS+MMHGRNNGKKLM VRIVK AFEIIHLLTG NPL
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Score = 168 bits (409), Expect = 2e-41
Identities = 83/92 (90%), Positives = 85/92 (92%)
Frame = +3
Query: 486 QVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNIKTI 665
QVLV AIINSGPREDSTRIGRAGTVRR AVDVSPLRRVNQAIWLLCTGAREAAF NIKTI
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTI 169
Query: 666 AECVADXXINAAKGXSNSYAIKKKDELERVAK 761
AEC+AD INAAKG SN YAIKK+DELERVAK
Sbjct: 170 AECLADELINAAKGSSNFYAIKKRDELERVAK 201
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 98.7 bits (235), Expect = 2e-20
Identities = 47/52 (90%), Positives = 48/52 (92%)
Frame = +3
Query: 606 AIWLLCTGAREAAFXNIKTIAECVADXXINAAKGXSNSYAIKKKDELERVAK 761
AIWLLCTGAREAAF NIKTIAEC+AD INAAKG SNSYAIKKKDELERVAK
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAK 52
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 85.0 bits (201), Expect = 3e-16
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +2
Query: 347 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKXAFEIIHLLTG 472
AQCPIVERLTNS+MMHGRNNGKKLM VRIVK AFEIIHLLTG
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTG 42
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.60
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 410 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 318
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 410 CHCSDRASLESL*GAPRLGTGLYGNACVH 324
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 410 CHCSDRASLESL*GAPRLGTGLYGNACVH 324
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 410 CHCSDRASLESL*GAPRLGTGLYGNACVH 324
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,695,319
Number of Sequences: 237096
Number of extensions: 1707605
Number of successful extensions: 2675
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2665
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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