Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A17
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   170   1e-42
Z75540-6|CAN86598.1|  584|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z75540-3|CAD01084.1|  581|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z75540-2|CAA99848.1|  582|Caenorhabditis elegans Hypothetical pr...    29   3.4  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  170 bits (413), Expect = 1e-42
 Identities = 82/92 (89%), Positives = 86/92 (93%)
 Frame = +3

Query: 486 QVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNIKTI 665
           QVLV A+INSGPREDSTRIGRAGTVRR AVDV+PLRRVNQAIWLLCTGAREAAF N+KTI
Sbjct: 116 QVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTI 175

Query: 666 AECVADXXINAAKGXSNSYAIKKKDELERVAK 761
           AEC+AD  INAAKG SNSYAIKKKDELERVAK
Sbjct: 176 AECLADELINAAKGSSNSYAIKKKDELERVAK 207



 Score =  148 bits (359), Expect = 5e-36
 Identities = 71/99 (71%), Positives = 78/99 (78%)
 Frame = +2

Query: 188 AADIPEIKLFGXWSCYXVXVSDMSLQXYISVKXXYAKYLPHSAGRYAHKRFRKAQCPIVE 367
           A + PE+ LFG WS   V VSD+SL  YI VK   AKYLPHSAGR+  +RFRKA CPIVE
Sbjct: 17  ATEAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHSAGRFQVRRFRKAACPIVE 76

Query: 368 RLTNSLMMHGRNNGKKLMAVRIVKXAFEIIHLLTGXNPL 484
           RL NSLMMHGRNNGKKLM VRIVK AFEII+LLTG NP+
Sbjct: 77  RLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPV 115


>Z75540-6|CAN86598.1|  584|Caenorhabditis elegans Hypothetical
           protein F37D6.2c protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = +3

Query: 477 TLWQVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNI 656
           +LWQV+    ++   RE  ++  + G ++R   +    RR+N  +   C G +E    ++
Sbjct: 399 SLWQVIERKSVHETEREHMSKRNKIGLLQRRFFETLEGRRINDEV--ACAGDKEREGFDL 456

Query: 657 KTIAE 671
            T  +
Sbjct: 457 TTTGD 461


>Z75540-3|CAD01084.1|  581|Caenorhabditis elegans Hypothetical
           protein F37D6.2b protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = +3

Query: 477 TLWQVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNI 656
           +LWQV+    ++   RE  ++  + G ++R   +    RR+N  +   C G +E    ++
Sbjct: 396 SLWQVIERKSVHETEREHMSKRNKIGLLQRRFFETLEGRRINDEV--ACAGDKEREGFDL 453

Query: 657 KTIAE 671
            T  +
Sbjct: 454 TTTGD 458


>Z75540-2|CAA99848.1|  582|Caenorhabditis elegans Hypothetical
           protein F37D6.2a protein.
          Length = 582

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = +3

Query: 477 TLWQVLVTAIINSGPREDSTRIGRAGTVRRXAVDVSPLRRVNQAIWLLCTGAREAAFXNI 656
           +LWQV+    ++   RE  ++  + G ++R   +    RR+N  +   C G +E    ++
Sbjct: 397 SLWQVIERKSVHETEREHMSKRNKIGLLQRRFFETLEGRRINDEV--ACAGDKEREGFDL 454

Query: 657 KTIAE 671
            T  +
Sbjct: 455 TTTGD 459


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,397,367
Number of Sequences: 27780
Number of extensions: 276765
Number of successful extensions: 471
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)