Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A16
(873 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 219 3e-57
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 214 7e-56
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 214 7e-56
SB_56| Best HMM Match : Actin (HMM E-Value=0) 213 2e-55
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 211 5e-55
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 174 9e-44
SB_54| Best HMM Match : Actin (HMM E-Value=0) 136 2e-32
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 136 3e-32
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 2e-28
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 117 1e-26
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 83 2e-16
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 58 1e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 5e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 51 1e-06
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 46 4e-05
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 45 9e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.075
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.13
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 32 0.70
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.6
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 30 2.1
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 30 2.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 2.8
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 29 3.8
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 29 3.8
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 5.0
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 6.6
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 6.6
SB_32924| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_53945| Best HMM Match : POPLD (HMM E-Value=1) 28 8.7
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 8.7
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 28 8.7
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 28 8.7
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 219 bits (534), Expect = 3e-57
Identities = 97/103 (94%), Positives = 99/103 (96%)
Frame = +3
Query: 156 MCDEEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQ 335
MCD++VAA VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD YVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 336 SKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
SKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 163 bits (397), Expect = 1e-40
Identities = 77/85 (90%), Positives = 80/85 (94%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAG 183
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYLMKI TERG SFTT
Sbjct: 183 GRDLTDYLMKILTERGYSFTT 203
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 214 bits (523), Expect = 7e-56
Identities = 96/103 (93%), Positives = 98/103 (95%)
Frame = +3
Query: 156 MCDEEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQ 335
M D+E+AA VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD YVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 336 SKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
SKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 163 bits (395), Expect = 2e-40
Identities = 76/85 (89%), Positives = 80/85 (94%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GV+HTVPIYEGYALPHAI+RLDLAG
Sbjct: 159 GVTHTVPIYEGYALPHAIIRLDLAG 183
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYLMKI TERG SFTT
Sbjct: 183 GRDLTDYLMKILTERGYSFTT 203
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 214 bits (523), Expect = 7e-56
Identities = 94/103 (91%), Positives = 98/103 (95%)
Frame = +3
Query: 156 MCDEEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQ 335
M D+++AA V+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD YVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 336 SKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
SKRGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 134 bits (324), Expect = 9e-32
Identities = 65/75 (86%), Positives = 68/75 (90%), Gaps = 2/75 (2%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 631 GVSHTVPIYE--GYA 669
GVSHTVPIYE GY+
Sbjct: 159 GVSHTVPIYEERGYS 173
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 213 bits (519), Expect = 2e-55
Identities = 95/101 (94%), Positives = 97/101 (96%)
Frame = +3
Query: 162 DEEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSK 341
++EVAA VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD YVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 342 RGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
RGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Score = 163 bits (397), Expect = 1e-40
Identities = 77/85 (90%), Positives = 80/85 (94%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 158 GVTHTVPIYEGYALPHAILRLDLAG 182
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYLMKI TERG SFTT
Sbjct: 182 GRDLTDYLMKILTERGYSFTT 202
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 211 bits (516), Expect = 5e-55
Identities = 94/101 (93%), Positives = 97/101 (96%)
Frame = +3
Query: 162 DEEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSK 341
+++VAA VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD YVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 342 RGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
RGILTLKYPIEHGIVTNWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Score = 163 bits (397), Expect = 1e-40
Identities = 77/85 (90%), Positives = 80/85 (94%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 158 GVTHTVPIYEGYALPHAILRLDLAG 182
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYLMKI TERG SFTT
Sbjct: 182 GRDLTDYLMKILTERGYSFTT 202
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 174 bits (423), Expect = 9e-44
Identities = 79/89 (88%), Positives = 82/89 (92%)
Frame = +3
Query: 162 DEEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSK 341
D++VAA V+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD YVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 342 RGILTLKYPIEHGIVTNWDDXEKIWHHTF 428
RGILTLKYPIEHGIVTNWDD EKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 125 bits (302), Expect = 4e-29
Identities = 58/68 (85%), Positives = 64/68 (94%)
Frame = +1
Query: 502 NREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYALPHA 681
N + M +IMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 682 ILRLDLAG 705
I+RLDLAG
Sbjct: 138 IIRLDLAG 145
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYLMKI TERG SFTT
Sbjct: 145 GRDLTDYLMKILTERGYSFTT 165
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 136 bits (329), Expect = 2e-32
Identities = 60/81 (74%), Positives = 69/81 (85%)
Frame = +1
Query: 463 PXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSH 642
P LLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LYA GRTTG V D GDGVSH
Sbjct: 2147 PVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSH 2206
Query: 643 TVPIYEGYALPHAILRLDLAG 705
TVP+Y+GY LPHA R+DLAG
Sbjct: 2207 TVPVYDGYWLPHATQRIDLAG 2227
Score = 59.3 bits (137), Expect = 4e-09
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3
Query: 183 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 281
V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2098 VIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSF 760
GRDLT YL ++ TERG SF
Sbjct: 2227 GRDLTHYLQRLVTERGYSF 2245
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 136 bits (328), Expect = 3e-32
Identities = 57/81 (70%), Positives = 73/81 (90%)
Frame = +1
Query: 463 PXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSH 642
P LLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA GRTTG+VLD+GDGVSH
Sbjct: 128 PVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSH 187
Query: 643 TVPIYEGYALPHAILRLDLAG 705
+VPIYEG+A+PH+I+R D+AG
Sbjct: 188 SVPIYEGFAMPHSIMRTDIAG 208
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 123 bits (296), Expect = 2e-28
Identities = 54/85 (63%), Positives = 66/85 (77%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
PRNT LLTE PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGD
Sbjct: 102 PRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGD 161
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GV+H P+YEG+ALPH RLD+AG
Sbjct: 162 GVTHICPVYEGFALPHLTRRLDIAG 186
Score = 85.0 bits (201), Expect = 7e-17
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +3
Query: 183 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGXKDPYVGDEAQSKRGILT 356
V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R +L
Sbjct: 10 VCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYMLE 69
Query: 357 LKYPIEHGIVTNWDDXEKIWHHTF 428
+ YP+++GIV NWDD + +W +TF
Sbjct: 70 VNYPMDNGIVRNWDDMKHVWDYTF 93
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 117 bits (281), Expect = 1e-26
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 523 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 702
IMFE FN+PA+YVAIQAVLSLYA GRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 703 G 705
G
Sbjct: 61 G 61
Score = 41.9 bits (94), Expect = 7e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYLMK+ TERG SFTT
Sbjct: 61 GRDLTDYLMKLMTERGYSFTT 81
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 83.4 bits (197), Expect = 2e-16
Identities = 36/81 (44%), Positives = 56/81 (69%)
Frame = +1
Query: 463 PXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSH 642
P L++EA N + REK+T++MFE +N PA ++ +VL+ +A GR+ G+V+DSG +
Sbjct: 35 PLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTS 94
Query: 643 TVPIYEGYALPHAILRLDLAG 705
VP+++GY L AI+R LAG
Sbjct: 95 AVPVHDGYVLQQAIVRSPLAG 115
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 57.6 bits (133), Expect = 1e-08
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +3
Query: 183 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 281
V+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1360 VIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 55.6 bits (128), Expect = 5e-08
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +3
Query: 150 FKMCDEEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGXKD-PYV 320
FK+ A V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 321 GDEAQSKRGILTL 359
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1
Query: 568 QAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 705
Q LSLYA G T G+ L SG + IYEG+ L H + L++ G
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGG 812
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 51.2 bits (117), Expect = 1e-06
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +3
Query: 294 GMGXKDPYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEH 461
G+ D ++GDEA K T K+PI H IV +WD E+ W + LR PE+H
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDH 332
Score = 32.3 bits (70), Expect = 0.53
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 604 TGIVLDSGDGVSHTVPI 654
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +3
Query: 168 EVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKRG 347
++A V+D G+ K GFA + APR++ P+ + + + + + ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 348 ILTLKY--PIEHGIVTNWDDXEKIWHHTFYNE 437
L Y P + G + NWD ++IW +TF E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +1
Query: 508 EKMTQIMFETFNTPAMYVAIQAVLSLYAXGRT------TGIVLDSGDGVSHTVPIYEGYA 669
+ M +I+FE +N A+ A LS Y + +V+D+G +H VP++ G
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKV 378
Query: 670 LPHAILR 690
+ A+ R
Sbjct: 379 IKKAVRR 385
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 44.8 bits (101), Expect = 9e-05
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 535 TFNTPAMYVAIQAVLSLYAXGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 705
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AG
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG 95
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 35.1 bits (77), Expect = 0.075
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -2
Query: 278 MAGPSHDRGKHCARSIISXEAGLAHTGAIV 189
MA + D G++ + SI+S E GLAHTGAI+
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAII 30
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 536 HSTRP-PCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPC 649
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 551 PCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPC 649
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +2
Query: 551 PCTSPSKPC----SRCTRXVVPPVSCWTPATVSPTPC-----PSTRDTHSP 676
P T PC + CT+ +P +TP T TPC PST +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 551 PCTSPSKPCSR----CTRXVVPPVSCWTPATVSPTPC 649
PCT PC+ CT P +TP+T TPC
Sbjct: 632 PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 551 PCTSPSKPC----SRCTRXVVPPVSCWTPATVSPTPC 649
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.9 bits (69), Expect = 0.70
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 499 ANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIV 615
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 548 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
PP P P + TR VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 536 HSTRPPCTSPSKPCSRCTRXV-VPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
HST ++PS P + CT P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -2
Query: 704 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPXAYSESTAWMATYMAGVLNVSNM 525
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 524 IWVIFSLLALGLR 486
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 710 HDPAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPXAYSESTAW 567
+ P + S +P T W +PSP+ T P ++T+W
Sbjct: 55 NSPLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 680 AWGSAYPS*MGTVWETPSPESSTIPVVRPXAYSESTAW 567
+W S P T W +PSP+ T P ++T+W
Sbjct: 77 SWTSPSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSW 114
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 536 HSTRPPCTSP--SKPCSRCTRXVVPPVSCWTPATVSP-TPCPSTRDTHSPTP 682
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Frame = +2
Query: 557 TSPSKPCSRCTRXVVPPVSCWTPATVS---------PTPCPSTRDTHSPTPSC-VWTWPG 706
T S+PC +CT V P + T A S PTP S R+ H +P WT G
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWTEKG 97
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 505 REKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIV 615
+E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 543 KEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 579
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 483 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 575
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 548 PPCTSP-SKPCSRCTRXVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS 685
P TSP + P +R + PP C + V PTP S++ + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 536 HSTRPPCTSPSKPCSR---CTRXVVPPVSCWTPATVSPTPCPSTRD--THSPTPSCVWTW 700
++T P T+P+KP + T P + PAT +PT +T T +PT T
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTP 125
Query: 701 PG 706
PG
Sbjct: 126 PG 127
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 539 STRPPCTSPSKPCSR---CTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 539 STRPPCTSPSKPCSR---CTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 53 TTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 539 STRPPCTSPSKPCSR---CTRXVVPPVSCWTPATVSPTPCPSTRD--THSPTPSCVWTWP 703
+T P T+P+KP + T P + PAT +PT +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRC---TRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 548 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPT-PCPSTRDTHSPTPS 685
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPT 679
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 548 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
P SP+ P P + TP T +PT T+ T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 253 GNTARGASSPAKPALHIPEP 194
GNT R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +2
Query: 557 TSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWP 703
T+P+ P + T P + TP T + TP +P P+ P
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPAAAAAAP 178
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 253 GNTARGASSPAKPALHIPEP 194
GNT R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 587 TRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPGR 709
T VVPP+ P V P+P + SPTPSC+ P +
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCIEQQPSQ 242
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 9/98 (9%)
Frame = +3
Query: 420 HTFYNELRVAPEEHPXPAY*GSPQ-PQGQQREDDPDHVRNIQ------HARHVRRH--PS 572
HT R AP+ + +P P G + PDH + H V +H P
Sbjct: 155 HTLGVSKRTAPDHPLGLSKRTAPDHPLGVSKRTAPDHPHGVSKRTAPDHPHGVSKHTAPD 214
Query: 573 RALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHP 686
L + R+ + G+ +R PH T P HP
Sbjct: 215 HTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHTAPDHP 252
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 522 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIR 668
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 533 KHSTRPPCTSPSKPCSRCTRXVVPPVSC----WTPAT-VSPTPCPSTRDTHSPTP 682
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_32924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +1
Query: 418 IIPSTMSCVSPPRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXG 597
++P +S S PR P L P+ NR+K Q T ++ A + L+ G
Sbjct: 310 VVPMPLSSSSQPRILPRLTARMDQGPRKNRDKQKQNGDVDELTADVFEEAMAEIQLFQGG 369
Query: 598 R 600
+
Sbjct: 370 K 370
>SB_53945| Best HMM Match : POPLD (HMM E-Value=1)
Length = 465
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +2
Query: 545 RPPCTSPSK--PCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT-WPGRDL 715
RPP T+P+ P S T PP+ TP + TP P+ + P T W +
Sbjct: 30 RPPETTPAPTTPTSPATPASGPPIR--TPIPLKETPTPALESAPAAMPDATDTAWNRLSV 87
Query: 716 TDYL 727
T +L
Sbjct: 88 TYFL 91
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 253 GNTARGASSPAKPALHIPEP 194
GNT R PAKP+L++P P
Sbjct: 540 GNTNRRTRIPAKPSLNLPSP 559
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 516 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRH 683
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 545 RPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/68 (27%), Positives = 22/68 (32%)
Frame = +2
Query: 578 SRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPGRDLTDYLMKIXTERGXS 757
S C V C P T PT P + T S +T + T LM RG
Sbjct: 617 SNCNNFETAGVVCERPTTDPPTTTPIPTTEATTTRSLYYTLKRKSQTVRLMNFGDHRGMG 676
Query: 758 FTTXRRXG 781
R G
Sbjct: 677 HVEVLRNG 684
>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = -2
Query: 704 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPXAYSESTAWMATYMAGVLNVSNM 525
P S + + + PS ++W+ P+P S+ P A S T + +N
Sbjct: 142 PKPSNKTVKQAAQTPSKPSSLWDAPTPTSAPPASAPPKAQSTQGMSSGTSEQPWFSPANT 201
Query: 524 IWVIFSLLALGLRGASVSRXGVFLGGD-TQL 435
+ + LA L G + +F G TQL
Sbjct: 202 VTAFGAKLASSLFGPITNENSLFGGAQPTQL 232
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,814,402
Number of Sequences: 59808
Number of extensions: 629381
Number of successful extensions: 2271
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2247
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2503194881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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