Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A16
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.7  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   8.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.5  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 14/54 (25%), Positives = 19/54 (35%)
 Frame = +1

Query: 400 TWRRFGIIPSTMSCVSPPRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYV 561
           TW    +  S +     PR  P   TE  L+    RE    +     N   +YV
Sbjct: 772 TWNTNAVDCSGLGVEEIPRRIPMDATEVYLDGNVLRELQNHVFIGRKNMRVLYV 825


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 727 EVVCEVTTRPSPDAGWR 677
           E+ C+VT  P P   WR
Sbjct: 329 EIKCDVTGTPPPPLVWR 345


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 642 VGDTVAGVQHDTGGTTXRVQREHGLDGDVHG 550
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 736  DLHEVVCEVTTRPSPDAGWRGGV 668
            DL +   +VT +P P   W G +
Sbjct: 987  DLDQHTLKVTWKPPPREDWNGEI 1009


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 756 EXPRSVXIFMR*SVRSRPGQVQTQDGVGECVSLVDG 649
           E  R +    R S  S+P Q    DG G  + LV+G
Sbjct: 207 EDARGILEAARRSNLSQPFQWLASDGWGRQIKLVEG 242


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 756 EXPRSVXIFMR*SVRSRPGQVQTQDGVGECVSLVDG 649
           E  R +    R S  S+P Q    DG G  + LV+G
Sbjct: 297 EDARGILEAARRSNLSQPFQWLASDGWGRQIKLVEG 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,226
Number of Sequences: 438
Number of extensions: 5625
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)