Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A16
(873 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 196 2e-50
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 196 2e-50
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 196 2e-50
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 196 2e-50
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 196 2e-50
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 196 2e-50
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 192 3e-49
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 192 3e-49
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 192 3e-49
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 185 4e-47
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 141 5e-34
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 141 6e-34
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 105 4e-23
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 83 2e-16
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 83 3e-16
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 77 2e-14
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 71 1e-12
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 54 2e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 52 4e-07
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 41 0.001
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 41 0.001
At3g05690.1 68416.m00636 CCAAT-binding transcription factor (CBF... 34 0.11
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 34 0.11
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 34 0.11
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 33 0.25
At1g10620.1 68414.m01204 protein kinase family protein contains ... 33 0.33
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 31 0.76
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 1.0
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 31 1.0
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 31 1.0
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 1.3
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 31 1.3
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 31 1.3
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.8
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 30 1.8
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 30 1.8
At1g76500.1 68414.m08901 DNA-binding family protein contains Pfa... 30 1.8
At1g11130.1 68414.m01274 leucine-rich repeat family protein / pr... 30 1.8
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 30 2.3
At3g24550.1 68416.m03083 protein kinase family protein contains ... 30 2.3
At1g30510.2 68414.m03732 ferredoxin--NADP(+) reductase, putative... 30 2.3
At1g30510.1 68414.m03731 ferredoxin--NADP(+) reductase, putative... 30 2.3
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 29 3.1
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 29 3.1
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 4.1
At3g28790.1 68416.m03593 expressed protein 29 4.1
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 4.1
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 29 4.1
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 4.1
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 29 4.1
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 29 5.4
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 5.4
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 29 5.4
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 29 5.4
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 29 5.4
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 28 7.1
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 7.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 7.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 7.1
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 28 7.1
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 28 9.4
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 9.4
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 28 9.4
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 196 bits (478), Expect = 2e-50
Identities = 87/100 (87%), Positives = 91/100 (91%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKR 344
E++ V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG KD YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 345 GILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
GILTLKYPIEHGIV+NWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 165 bits (401), Expect = 3e-41
Identities = 79/85 (92%), Positives = 79/85 (92%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYA GRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAG 184
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTD LMKI TERG FTT
Sbjct: 184 GRDLTDSLMKILTERGYMFTT 204
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 196 bits (478), Expect = 2e-50
Identities = 87/100 (87%), Positives = 91/100 (91%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKR 344
E++ V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG KD YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 345 GILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
GILTLKYPIEHGIV+NWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 167 bits (406), Expect = 8e-42
Identities = 80/85 (94%), Positives = 80/85 (94%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA GRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAG 184
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYLMKI TERG SFTT
Sbjct: 184 GRDLTDYLMKILTERGYSFTT 204
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 196 bits (477), Expect = 2e-50
Identities = 87/100 (87%), Positives = 90/100 (90%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKR 344
E++ V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG KD YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 345 GILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
GILTLKYPIEHGIV NWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 167 bits (406), Expect = 8e-42
Identities = 80/85 (94%), Positives = 80/85 (94%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA GRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAG 184
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTD+LMKI TERG SFTT
Sbjct: 184 GRDLTDHLMKILTERGYSFTT 204
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 196 bits (477), Expect = 2e-50
Identities = 87/100 (87%), Positives = 90/100 (90%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKR 344
E++ V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG KD YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 345 GILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
GILTLKYPIEHGIV NWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 165 bits (401), Expect = 3e-41
Identities = 79/85 (92%), Positives = 79/85 (92%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYA GRTTGIVLDSGD
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAG 184
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTD LMKI TERG SFTT
Sbjct: 184 GRDLTDALMKILTERGYSFTT 204
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 196 bits (477), Expect = 2e-50
Identities = 87/100 (87%), Positives = 90/100 (90%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKR 344
E++ V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG KD YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 345 GILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
GILTLKYPIEHGIV NWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 167 bits (406), Expect = 8e-42
Identities = 80/85 (94%), Positives = 80/85 (94%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA GRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAG 184
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTD+LMKI TERG SFTT
Sbjct: 184 GRDLTDHLMKILTERGYSFTT 204
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 196 bits (477), Expect = 2e-50
Identities = 87/100 (87%), Positives = 90/100 (90%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKR 344
E++ V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG KD YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 345 GILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
GILTLKYPIEHGIV NWDD EKIWHHTFYNELRVAPEEHP
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
Score = 165 bits (401), Expect = 3e-41
Identities = 79/85 (92%), Positives = 79/85 (92%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYA GRTTGIVLDSGD
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAG 184
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTD LMKI TERG SFTT
Sbjct: 184 GRDLTDALMKILTERGYSFTT 204
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 192 bits (467), Expect = 3e-49
Identities = 82/100 (82%), Positives = 90/100 (90%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKR 344
+++ V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM KD YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 345 GILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
GILTLKYPIEHG+V+NWDD EKIWHHTFYNELR+APEEHP
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
Score = 163 bits (395), Expect = 2e-40
Identities = 77/85 (90%), Positives = 80/85 (94%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA GRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 160 GVSHTVPIYEGFSLPHAILRLDLAG 184
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYLMKI TERG FTT
Sbjct: 184 GRDLTDYLMKILTERGYMFTT 204
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 192 bits (467), Expect = 3e-49
Identities = 82/100 (82%), Positives = 90/100 (90%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKR 344
+++ V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM KD YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 345 GILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
GILTLKYPIEHG+V+NWDD EKIWHHTFYNELR+APEEHP
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
Score = 163 bits (395), Expect = 2e-40
Identities = 77/85 (90%), Positives = 80/85 (94%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA GRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 160 GVSHTVPIYEGFSLPHAILRLDLAG 184
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYLMKI TERG FTT
Sbjct: 184 GRDLTDYLMKILTERGYMFTT 204
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 192 bits (467), Expect = 3e-49
Identities = 82/100 (82%), Positives = 90/100 (90%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKR 344
+++ V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM KD YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 345 GILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
GILTLKYPIEHG+V+NWDD EKIWHHTFYNELR+APEEHP
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHP 104
Score = 163 bits (395), Expect = 2e-40
Identities = 77/85 (90%), Positives = 80/85 (94%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA GRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVSHTVPIYEG++LPHAILRLDLAG
Sbjct: 160 GVSHTVPIYEGFSLPHAILRLDLAG 184
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYLMKI TERG FTT
Sbjct: 184 GRDLTDYLMKILTERGYMFTT 204
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 185 bits (450), Expect = 4e-47
Identities = 79/100 (79%), Positives = 90/100 (90%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKR 344
+E A V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM KD +VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 345 GILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
GIL+LKYPIEHG+V+NWDD EKIWHHTFYNELR+ PEEHP
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHP 105
Score = 153 bits (372), Expect = 1e-37
Identities = 72/85 (84%), Positives = 76/85 (89%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+ GRTTGIVLDSGD
Sbjct: 101 PEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGD 160
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 161 GVSHTVPIYEGYALPHAILRLDLAG 185
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLT+YL KI ERG ++TT
Sbjct: 185 GRDLTEYLTKIMMERGYTYTT 205
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 141 bits (342), Expect = 5e-34
Identities = 67/85 (78%), Positives = 73/85 (85%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+A GRTTG VLDSGD
Sbjct: 55 PEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGD 114
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GVS+ VPIYEG ALPHAILRLDLAG
Sbjct: 115 GVSYIVPIYEGSALPHAILRLDLAG 139
Score = 105 bits (251), Expect = 5e-23
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = +3
Query: 288 MVGMGXKDPYVGDEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
MVGM D +VGD+A+++ GILTL YP+EHG+V+NWDD EKIW+HTFY+ELRVAPEEHP
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHP 59
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERG 751
GR LT+YLMKI ERG
Sbjct: 139 GRHLTNYLMKIMMERG 154
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 141 bits (341), Expect = 6e-34
Identities = 64/85 (75%), Positives = 73/85 (85%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P P LLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+ GRTTG+VLD G+
Sbjct: 89 PEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGE 148
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
VSHTVP+YEGYALPH ILRLDL G
Sbjct: 149 RVSHTVPVYEGYALPHGILRLDLGG 173
Score = 134 bits (324), Expect = 7e-32
Identities = 60/94 (63%), Positives = 70/94 (74%)
Frame = +3
Query: 183 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKRGILTLK 362
V D G GM +AGFAGD+AP+ VFP +VGRPR G+ + YVG+E + R ILTLK
Sbjct: 5 VCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTLK 59
Query: 363 YPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
P+EHGIV NWDD EKIWH+TFYNELRV PEEHP
Sbjct: 60 DPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +2
Query: 704 GRDLTDYLMKIXTERGXSFTT 766
GRDLTDYL++I TERG ++TT
Sbjct: 173 GRDLTDYLIEIMTERGYTYTT 193
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 105 bits (252), Expect = 4e-23
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 630
P + LLT+ PLNP NREKM + MFE +N +++ IQAVL+LYA G TG+V+DSGD
Sbjct: 99 PSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGD 158
Query: 631 GVSHTVPIYEGYALPHAILRLDLAG 705
GV+H VP+ +GY+ PH R+++AG
Sbjct: 159 GVTHVVPVVDGYSFPHLTKRMNVAG 183
Score = 99.5 bits (237), Expect = 3e-21
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +3
Query: 183 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGXKDPYVGDEAQSKRGILT 356
V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 8 VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQLD 67
Query: 357 LKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEE 458
+ YP+ +GIV NWDD E +W H FYNEL++ P +
Sbjct: 68 INYPVHNGIVQNWDDMEHVWDHAFYNELKINPSD 101
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 83.4 bits (197), Expect = 2e-16
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 16/116 (13%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 299
+EV+A VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 300 GXKDPYVGDEAQS-KRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEHP 464
G + Y G +A + +R + + P + GIVT+WD + +W H F N L + P EHP
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRT-----TGIV 615
P + LLTE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V
Sbjct: 117 PEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVV 176
Query: 616 LDSGDGVSHTVPIYEGYALPHAILRLDLAG 705
+D GDG +H VP+ EGY + I + +AG
Sbjct: 177 VDVGDGATHVVPVAEGYVIGSCIKSIPIAG 206
Score = 64.9 bits (151), Expect = 7e-11
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 21/116 (18%)
Frame = +3
Query: 177 AXVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 302
A V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 303 XKDPYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEEH 461
D Y+GDEA +K R T L YPIEHG V +WD E+ W +N LR PE+H
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDH 120
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 77.0 bits (181), Expect = 2e-14
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +1
Query: 436 SCVS-PPRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGI 612
SC+ P P LL E PLN + REK ++MFE + PA+++A VL+ +A GR T +
Sbjct: 116 SCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSL 175
Query: 613 VLDSGDGVSHTVPIYEGYALPHAILRLDLAG 705
V+D G G + P+++GY L A++ L G
Sbjct: 176 VVDCGGGSTTISPVHDGYVLQKAVVSSPLGG 206
Score = 75.8 bits (178), Expect = 4e-14
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 22/122 (18%)
Frame = +3
Query: 165 EEVAAXVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGXKDP-- 314
+EV+A VVD GS CKAG+AG+DAP+AVFPS++G M +D
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 315 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAPEE 458
YVG +A S +R + + PI+ GIV++WD + IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 459 HP 464
HP
Sbjct: 125 HP 126
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/80 (45%), Positives = 46/80 (57%)
Frame = +1
Query: 469 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTV 648
L T+ PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G
Sbjct: 92 LFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIA 151
Query: 649 PIYEGYALPHAILRLDLAGS 708
P+ EG A R +L G+
Sbjct: 152 PVLEGAVQHIASKRFELGGT 171
Score = 34.3 bits (75), Expect = 0.11
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3
Query: 177 AXVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKRGIL 353
A VVD GS KAG A D +P + PS + R MV G D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSS---ADNPTTVFEDV 53
Query: 354 TLKYPIEHGIVTNWDDXEKIWHHTFYNEL 440
TL PIE G++ +WD E + + Y L
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGL 81
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Frame = +1
Query: 451 PRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI-QAVLSLYAXGRTT------- 606
P ++ LLTEAPL+ + + +++FE F ++Y+A Q+++ LY R
Sbjct: 92 PSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKT 151
Query: 607 --GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 705
+V+D G +H VP+ + L HAI R+DL G
Sbjct: 152 QCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = +3
Query: 183 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDPYVGDEAQSKRGILTLK 362
V+DNG G+ KAG G+ P V P+ + +P + + DE ++
Sbjct: 6 VLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AVR 62
Query: 363 YPIEHGIVTNWDDXEKIWHHTFYNELRVAP 452
PI+ G + N D +IW H F + L +AP
Sbjct: 63 RPIDRGYLINSDLQREIWSHLFTSLLHIAP 92
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +1
Query: 463 PXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS-----LYAXGRTTGIVLDSG 627
P L+TE NP +R KM +++FET+ PA+ + A S L+ + GIVL G
Sbjct: 118 PILITECACNPVQSRSKMAELLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPG 177
Query: 628 DGVSHTVPIYEGYALPHAILRLDLAG 705
+H++P +G + R ++ G
Sbjct: 178 FTTTHSIPFVDGEPIYKGSSRTNIGG 203
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 183 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 281
V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 23 VIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 496 KANREKMTQIMFETF---NTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEG 663
KA+R ++ +F N PA+ QAVL+LYA RT+GIV++ G V +PI G
Sbjct: 212 KASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 496 KANREKMTQIMFETF---NTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEG 663
KA+R ++ +F N PA+ QAVL+LYA RT+GIV++ G V +PI G
Sbjct: 212 KASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At3g05690.1 68416.m00636 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 295
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 492 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRT 671
P + ED +V + Q+ +RR SRA A V + + R+ + H HL +R
Sbjct: 128 PLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRR 187
Query: 672 P 674
P
Sbjct: 188 P 188
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVS------PTPCPSTR-DTHSPTPSCVWT 697
+T PP SP P + PPV+ PA ++ P P P+T+ D+ SP+PS
Sbjct: 85 ATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSPP 144
Query: 698 WPGRD 712
P D
Sbjct: 145 LPSSD 149
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 542 TRPPCTSPSKPCSRCTRXVV--PPVSCWTPATVSPTPCPSTRDTHSPTP 682
T PP +P+ P PPVS P T SP P + +P P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVS------PTPCPSTR-DTHSPTPSCVWT 697
+T PP SP P + PPV+ PA ++ P P P+T+ D+ SP+PS
Sbjct: 85 ATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSPP 144
Query: 698 WPGRD 712
P D
Sbjct: 145 LPSSD 149
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 542 TRPPCTSPSKPCSRCTRXVV--PPVSCWTPATVSPTPCPSTRDTHSPTP 682
T PP +P+ P PPVS P T SP P + +P P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
S PP +PS P T V PP TP+ SPTP P + +PTPS
Sbjct: 98 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
S PP +PS P T V PP TP+ SPTP P + +PTPS
Sbjct: 116 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
S PP +PS P T V PP TP+ SPTP T SP P
Sbjct: 134 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPP-VSCWTPATVSPTPCPSTRDTHSPTPS 685
+T+PP TSP P S T+ PP + P P P SP PS
Sbjct: 40 TTQPPATSPPSPPSPDTQTSPPPATAAQPPPNQPPNTTPPPTPPSSPPPS 89
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = +2
Query: 548 PPCTS---PSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDT-HSPTPSC 688
PPC C+ + PP+SC TP PCP + HS T C
Sbjct: 626 PPCLEMIFTDLTCACGRTSIPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 480 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSYHR 608
GSP+ +G + E+D D + NI+H + +H + A+ SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3
Query: 412 IFSXSSQLVTIPCSMGYLRVRIPLLLCASSPT*GSFXPIPTIT 284
IFS SS+LVT P S+ +R R ++L SS + G P +T
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSSSSGGGGKPTILVT 52
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 545 RPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 694
+PP P P + T P PA V P P P + +P P +W
Sbjct: 79 KPPQPQPQPP-QKPTAPAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
S PP T PS P + + P S TP+ SP P P T T PTP
Sbjct: 526 SPSPPITVPSPPSTPTSPGSPPSPSSPTPS--SPIPSPPTPST-PPTP 570
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 533 KHSTRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 691
K T+PP ++P P ++ PP S P P P P T +PTP V
Sbjct: 129 KPPTKPPPSTPKPPTTK------PPPSTPKPPHHKPPPTPCPPPTPTPTPPVV 175
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +2
Query: 545 RPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 691
+PP T P T VV P + P PTP P +PTP +
Sbjct: 157 KPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVI 205
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 539 STRPPCTSPSKPCSR-CTRXVVPPVSCWTPATVS-PTPCPSTRDTHSPTPSCV 691
+T+PP ++P P + PP TP V+ PTP P +PTP V
Sbjct: 143 TTKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVV 195
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +2
Query: 545 RPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 691
+PP T P + PP C P T PTP P +PTP +
Sbjct: 140 KPPTTKPPPSTPKPPHHKPPPTPC-PPPT--PTPTPPVVTPPTPTPPVI 185
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 548 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 691
PP +P P T V+ P + P PTP P +PTP +
Sbjct: 172 PPVVTPPTP----TPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVI 215
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 548 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 691
PP +P P T VV P + P PTP P +PTP V
Sbjct: 182 PPVITPPTP----TPPVVTPPTPTPPVITPPTPTPPVITPPTPTPPVV 225
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 548 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 691
PP +P P T V+ P + P PTP P +PTP V
Sbjct: 192 PPVVTPPTP----TPPVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV 235
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +2
Query: 548 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
PP +P P T V+ P + P PTP P +PTP
Sbjct: 202 PPVITPPTP----TPPVITPPTPTPPVVTPPTPTPPVVTPPTPTP 242
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 551 PCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSP 676
PC SP KP + + V P PA +PTP PS + SP
Sbjct: 97 PCPSPPKPPAPTPKPVPPHGPPPKPAP-APTPAPSPKPAPSP 137
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 548 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 691
PP P+ P + P P P PCPS +PTP V
Sbjct: 65 PPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPV 112
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 536 HSTRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
HS PP SP P + PPV P V+P P ++ ++PTPS
Sbjct: 793 HSPPPPVHSPPPPSPIYSPP--PPVFSPPPKPVTPLPPATSPMANAPTPS 840
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +2
Query: 536 HSTRPPCTSPSKPCSRCTRXVV--PPVSCWTPATVSPTPCPSTRDTHSPTP 682
HS PP SP P V PP ++P +P P HSP P
Sbjct: 711 HSPPPPVHSPPPPVHSPPPPVQSPPPPPVFSPPPPAPIYSPPPPPVHSPPP 761
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Frame = +2
Query: 536 HSTRPPCTSPSKPCSR--------CTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
H T P T PS C PP TP+T S TP P T +H+PTP
Sbjct: 45 HGTPPSHTPPSSNCGSPPYDPSPSTPSHPSPPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Frame = +2
Query: 536 HSTRPPCTSPSKPCSR--------CTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
H T P T PS C PP TP+T S TP P T +H+PTP
Sbjct: 45 HGTPPSHTPPSSNCGSPPYDPSPSTPSHPSPPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At1g76500.1 68414.m08901 DNA-binding family protein contains Pfam
domain, PF02178: AT hook motif
Length = 302
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 429 YNELRVAPEEHPXPAY*GSPQPQGQQREDDPD 524
+++L+ P+ HP P PQPQ Q +D+ D
Sbjct: 24 HHQLQPQPQLHPLPQPQPQPQPQQQNSDDESD 55
>At1g11130.1 68414.m01274 leucine-rich repeat family protein /
protein kinase family protein contains leucine
rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat transmembrane protein kinase 2 [Zea mays]
gi|3360291|gb|AAC27895
Length = 768
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 548 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPGRD 712
PP T + P R +PPVS PA +P + P+P VW+ P D
Sbjct: 258 PPATHRAPPVPR-----IPPVSGVPPAPFAPFAPLQPQQHPPPSPPLVWSPPSSD 307
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
+T PP +P P + PP + PAT P+ PS D + +P
Sbjct: 41 ATPPPVATPP-PAATPAPATPPPAATPAPATTPPSVAPSPADVPTASP 87
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 539 STRPPCTSP-SKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
S+ PP T+P S P S T PP S P ++ P P + P PS
Sbjct: 32 SSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPS 81
>At1g30510.2 68414.m03732 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 382
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = +1
Query: 424 PSTMSCVSPPRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRT 603
PST C+S + + +T +P+ + ++ + + A V+++ V+ A G T
Sbjct: 60 PSTTICMSVQQTSSSKVTVSPIELEDPKDPPLNLYKPKESYTAKIVSVERVVGPKAPGET 119
Query: 604 TGIVLDSGDGVSHTVPIYEG 663
IV+D DG +P +EG
Sbjct: 120 CHIVIDH-DG---NLPYWEG 135
>At1g30510.1 68414.m03731 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 381
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = +1
Query: 424 PSTMSCVSPPRNTPXLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRT 603
PST C+S + + +T +P+ + ++ + + A V+++ V+ A G T
Sbjct: 59 PSTTICMSVQQTSSSKVTVSPIELEDPKDPPLNLYKPKESYTAKIVSVERVVGPKAPGET 118
Query: 604 TGIVLDSGDGVSHTVPIYEG 663
IV+D DG +P +EG
Sbjct: 119 CHIVIDH-DG---NLPYWEG 134
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 536 HSTRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPT 679
H+ +PP P P C PP P TV P P P + PT
Sbjct: 59 HTPKPPTVKPPPPYIPCP----PPPYTPKPPTVKPPPPPYVKPPPPPT 102
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +2
Query: 551 PCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPGRDL 715
P PS P CT PP S P S P P P P+ V+T+P DL
Sbjct: 49 PPPPPSPPPPSCTPSPPPP-SPPPPKKSSCPPSPLPPPPPPPPPNYVFTYPPGDL 102
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 536 HSTRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
+S+ PP SP+ CTR PP P SP P P SP P
Sbjct: 518 YSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPP-PEPYYYSSPPP 565
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
S RPP +P P S + P+ P SP P +SP P
Sbjct: 393 SPRPPVVTPLPPPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPP 440
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 602 PPVSCWTPATVSP-TPCPSTRDTHSPTPS 685
P S TP+T +P TP PST +PTPS
Sbjct: 281 PTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCT--RXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
+T PP T+ + P + PPVS P TP P+ T P P
Sbjct: 36 TTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAP 85
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPGR--- 709
STRP TS + S + + +PA V P T S PS TWP R
Sbjct: 713 STRPDRTSATNLTSDVSGVTSKRQTRTSPAPVMPMILNQTTKMKSDEPSITSTWPDRTSA 772
Query: 710 -DLTDYLMKIXTER 748
DLT + + + R
Sbjct: 773 TDLTSDVSGVISSR 786
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTP 646
S PP SP PC + PPV + P T SP P
Sbjct: 521 SPPPPPPSPPPPCPESSPP--PPVVYYAPVTQSPPP 554
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 539 STRPPCT-SPSKPCSRCTRXVVPPVSCWTPATVSPTP 646
+T PP T +P+ P + T +VPPV+ P T++P P
Sbjct: 47 ATFPPVTITPTNPAT--TVPIVPPVTTIPPPTLTPPP 81
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 542 TRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
TRP T+PS + T V PVS P +V+P+P + + + P
Sbjct: 157 TRPTSTAPSPVSAHPTSVVPSPVSV-HPTSVAPSPVSACLTSEASKP 202
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +2
Query: 551 PCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
P SP P S PP S TP SP P P + SPTP
Sbjct: 217 PLPSPG-PDSPLPLPGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 558 RRHPSRALAVRVRSYHRYRAGLRRR 632
RR PSR+L+ R RSY R R+ +RRR
Sbjct: 121 RRSPSRSLS-RSRSYSRSRSPVRRR 144
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 558 RRHPSRALAVRVRSYHRYRAGLRRR 632
RR PSR+L+ R RSY R R+ +RRR
Sbjct: 132 RRSPSRSLS-RSRSYSRSRSPVRRR 155
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 558 RRHPSRALAVRVRSYHRYRAGLRRR 632
RR PSR+L+ R RSY R R+ +RRR
Sbjct: 162 RRSPSRSLS-RSRSYSRSRSPVRRR 185
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 599 VPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
+PPV+ TP+ ++ P P T +PT S
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 536 HSTRPPCTSPSKPCSR---CTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
HS PP SP P PP+ TP T +PTP S+ T PTPS
Sbjct: 623 HSPPPPVYSPPPPTFSPPPTHNTNQPPMGAPTP-TQAPTP--SSETTQVPTPS 672
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 324 DEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAP 452
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 324 DEAQSKRGILTLKYPIEHGIVTNWDDXEKIWHHTFYNELRVAP 452
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 603 HRYRAGLRRRCL-PHRAHLRGIRTPPRHPASG 695
+ ++AG R R L P + L +R PPR PA+G
Sbjct: 601 YTFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 539 STRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 685
ST PP P + V P S T + SP+ PS + SP+ S
Sbjct: 662 STSPPAGHLGSPSDTPSSVVTPSASPSTSPSASPSVSPSAFPSASPSAS 710
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +2
Query: 536 HSTRPPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTP 682
HS PP S P + PPV P SP P S +SP P
Sbjct: 594 HSPPPPAPVHSPPPPVHSPPPPPPVYSPPPPVFSPPPSQSPPVVYSPPP 642
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 548 PPCTSP-SKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRD 664
PPC P S P S + PP PA P P P T D
Sbjct: 77 PPCPPPPSPPPSPPPPQLPPPPQLPPPAPPKPQPSPPTPD 116
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,131,858
Number of Sequences: 28952
Number of extensions: 401950
Number of successful extensions: 1443
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2048424000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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