Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A15
         (946 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-...    91   4e-17
UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Mandu...    47   8e-04
UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 1...    46   0.002

>UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-6
           precursor; n=2; Bombyx mori|Rep: Low molecular 30 kDa
           lipoprotein PBMHP-6 precursor - Bombyx mori (Silk moth)
          Length = 256

 Score = 91.1 bits (216), Expect = 4e-17
 Identities = 52/88 (59%), Positives = 56/88 (63%)
 Frame = +2

Query: 107 LPLFAFVLAVCCAGFSRHTCTKTLMXYWRSSCI*VSSLVNTRTAIAKCSEYLKEKKGEVI 286
           L LFAFVLAVC    +     +T         + V  +    TAIAKCSEYLKEKKGEVI
Sbjct: 3   LTLFAFVLAVCALASNATLAPRTDDVLAEQLYMSVV-IGEYETAIAKCSEYLKEKKGEVI 61

Query: 287 KEAVKRLIENGKXKTMDFAXQLWXKGXK 370
           KEAVKRLIENGK  TMDFA QLW K  K
Sbjct: 62  KEAVKRLIENGKRNTMDFAYQLWTKDGK 89


>UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Manduca
           sexta|Rep: Microvitellogenin precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 249

 Score = 46.8 bits (106), Expect = 8e-04
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +2

Query: 236 AIAKCSEYLKEKKGEVIKEAVKRLIENGKXKTMDFAXQLW 355
           A+AK  E  K+ KG++I EAV RLI + +  TM++A QLW
Sbjct: 36  AVAKSKELQKQGKGDIITEAVNRLIRDSQRNTMEYAYQLW 75


>UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 19G1
           precursor; n=3; Bombyx mori|Rep: Low molecular mass 30
           kDa lipoprotein 19G1 precursor - Bombyx mori (Silk moth)
          Length = 256

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = +2

Query: 233 TAIAKCSEYLKEKKGEVIKEAVKRLIENGKXKTMDFAXQLWXKGXK 370
           +A+ K     +EKK EVI   V +LI N K   M++A QLW +G K
Sbjct: 42  SAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLWLQGSK 87


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,214,506
Number of Sequences: 1657284
Number of extensions: 5481099
Number of successful extensions: 13361
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13354
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86957532651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)