Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A14
         (925 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7QWD5 Cluster: Chromosome undetermined scaffold_203, w...    34   5.9  

>UniRef50_A7QWD5 Cluster: Chromosome undetermined scaffold_203,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_203, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 306

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
 Frame = +3

Query: 30  SWTSLXLXRXXXSSCFCGAVFVWCX-SGTXPVPFCARSXXVPLRFAWVCIRRPPSWSPLG 206
           S+ S+ L R     C     F  C  S    + FC +S   P    + C      WS  G
Sbjct: 212 SFHSMDLSREAKDGCSRDMEFSTCRASAQLTLYFCTQSLSFPCDLPYQCSNHSCCWSCKG 271

Query: 207 RGCCQLQNGFVERYHVPIY 263
            GCC   +  V R+    Y
Sbjct: 272 LGCCLTVSSSVCRHKTDNY 290


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,396,888
Number of Sequences: 1657284
Number of extensions: 6581697
Number of successful extensions: 14616
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 14339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14613
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84851082477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)