Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A14
         (925 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.5  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   5.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   5.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 148 SHCVSRGSASVGRHLGRRW 204
           + C  + SA++ + LGRRW
Sbjct: 499 AECTLKESAAINQILGRRW 517


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 148 SHCVSRGSASVGRHLGRRW 204
           + C  + SA++ + LGRRW
Sbjct: 391 AECTLKESAAINQILGRRW 409


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 241 STNPFCSWQQPRPSGDQDGGRRMQTHAK 158
           ST P   W +P  +   DG + +QT  K
Sbjct: 405 STTPRPEWARPPSTPSADGSKPVQTTPK 432


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 370 RTCYNFYSI*IELKFQFNHY 311
           +T   F ++ +E +F FNHY
Sbjct: 11  QTYTRFQTLELEKEFHFNHY 30


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 370 RTCYNFYSI*IELKFQFNHY 311
           +T   F ++ +E +F FNHY
Sbjct: 162 QTYTRFQTLELEKEFHFNHY 181


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 370 RTCYNFYSI*IELKFQFNHY 311
           +T   F ++ +E +F FNHY
Sbjct: 221 QTYTRFQTLELEKEFHFNHY 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,404
Number of Sequences: 336
Number of extensions: 1750
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25858250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)