Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A13
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    27   0.24 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   0.99 
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          24   1.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.0  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   5.3  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 695  PPPPPPPP 718
            PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 109 MIFVLALLAMANAQDPVRVVENADSGNGYEPIDTRPGTSLIPPKRLXTLNW 261
           ++++  L  + NA +  R       G  +   + RP TSL+  ++L  L W
Sbjct: 214 VVYIEQLTKLNNAVEEKRPELTNRKGVVFHHDNARPHTSLVTRQKLLELGW 264


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +1

Query: 109 MIFVLALLAMANAQDPVRVVENADSGNGYEPIDTRPGTSLIPPKRLXTLNW 261
           ++++  L  + NA +  R       G  +   D RP T L+  ++L  L W
Sbjct: 93  VVYIEHLTKLNNAIEEKRFELTNRKGVVFHHDDARPHTYLVTRQKLLELGW 143


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 694 PXPPPPPP 717
           P PPPPPP
Sbjct: 341 PAPPPPPP 348


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 695  PPPPPPPP 718
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864



 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 615  PPPPPPXXXXXN 650
            PPPPPP     N
Sbjct: 1859 PPPPPPRNHDQN 1870


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
 Frame = +1

Query: 298 GPXXRXTRSPKGP----PLXFXXPPPPXFPPGXXP 390
           GP     +SP+ P    P      PPP  PPG  P
Sbjct: 22  GPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = +1

Query: 109 MIFVLALLAMANAQDPVRVVENADSGNGYEPIDTRPGTSLIPPKRLXTLNW 261
           ++++  L  + NA +  R          +   + RP TSL+  ++L  L W
Sbjct: 92  VVYIEQLTKLNNAVEEKRPELTNRKSVVFHHDNARPHTSLVTRQKLLELGW 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,131
Number of Sequences: 438
Number of extensions: 7230
Number of successful extensions: 68
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)