Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A12
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0039 - 12269928-12270103,12270871-12271015,12271066-122710... 33 0.30
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 30 2.1
08_02_1374 + 26519720-26519989,26520679-26520737,26520810-265209... 30 2.8
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 30 2.8
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858... 30 2.8
09_03_0040 + 11816056-11819069,11819837-11820428 29 4.9
06_01_0934 - 7212408-7212794,7212887-7213416,7214192-7214302,721... 29 4.9
05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335 29 4.9
04_04_0977 + 29851086-29851463,29852054-29852551,29853665-298537... 29 4.9
02_02_0403 - 9866122-9867231 29 4.9
03_01_0381 - 2960533-2960805 29 6.5
02_01_0384 - 2781362-2782299,2782320-2782428 29 6.5
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 29 6.5
04_04_0265 + 24040689-24041051,24041210-24041457,24041845-240423... 28 8.5
03_06_0614 - 35099225-35099461,35099545-35099694,35099919-351000... 28 8.5
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 28 8.5
>10_07_0039 -
12269928-12270103,12270871-12271015,12271066-12271094,
12271394-12271478
Length = 144
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 196 DPGARVVPGAAREPRHRPAHSHTL 267
D G R VPG + PRHRP H T+
Sbjct: 81 DGGRRAVPGQSTVPRHRPRHDPTI 104
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = -1
Query: 300 TSSSQPASVLQKGVTVCWTMTRLTGRARYDTCTGIKPSHCFLLTTSQSAAISVRSELRAS 121
TS+S A++ + T RL + + +PS ++ +S S RS LRAS
Sbjct: 35 TSASASAAMQMQAATTTTAARRLAPKPQ-PQANRCRPSSVSVVAAGRSRRRSARSSLRAS 93
Query: 120 ASTTAEWRRAMSRSGACQHVSTR 52
AS E + S + +TR
Sbjct: 94 ASLDQEVKERASPAAGKSGQATR 116
>08_02_1374 +
26519720-26519989,26520679-26520737,26520810-26520924,
26521092-26521136,26521424-26521477
Length = 180
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 14 PXPSREFLKIWHARVLTCWHAPLLDMARLH 103
P S E +++ A+ CWH LLD+A+ H
Sbjct: 3 PRHSNEGIRLDFAKTNKCWHHTLLDIAKPH 32
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 441 SSCTRRCAAPTCSQPEPSYTLPLPPTRNEGPMSQYCKAS 325
+S T +P+ SQP PSY+ P T + GP Y S
Sbjct: 1779 TSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTS 1817
>07_03_0446 -
18285132-18285221,18285437-18285499,18285805-18285867,
18286079-18286129,18286413-18286506,18286696-18286856,
18287089-18287145,18287380-18287493,18287934-18287999,
18288063-18288266,18289207-18289284,18289669-18289788,
18290425-18290491,18290635-18290735,18290820-18290936,
18292024-18292107,18292181-18292309,18292385-18292510,
18292622-18292696,18292814-18292947,18293032-18293137,
18293220-18293276,18294387-18294573,18295244-18295407,
18296129-18296353,18296538-18296744,18297043-18297375,
18297604-18297993
Length = 1220
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 323 CGWSGYSARAPRSQRPSCR 267
CG+ GYS AP++ RPSCR
Sbjct: 63 CGY-GYSTPAPKAPRPSCR 80
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 526 RSSDRSASSIAPLGSSVLKLPMNATPMDL 440
R R+AS++A G+S+ +LP+ ATP+ +
Sbjct: 301 RDCGRAASTLAESGASMEELPLEATPISV 329
>06_01_0934 -
7212408-7212794,7212887-7213416,7214192-7214302,
7214322-7214811
Length = 505
Score = 29.1 bits (62), Expect = 4.9
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Frame = +2
Query: 188 DGLIPVHVSYLARPVSLVIVQHTVTPFCRTDAGCEELVRNIQTNHME-ALQY------WD 346
DGL PVHV+ +A S V + C C+EL+ N Q N + A++Y W
Sbjct: 253 DGLFPVHVAAIAGKAS---VTRMLMEMC---LNCDELLDNKQRNVLHCAVEYGRLMVVWY 306
Query: 347 I--GPSFLVGGNGKVYEGSGWLHVGAAH 424
I P F N EG+ LH+ H
Sbjct: 307 ICRNPKFTRLLNAGDCEGNTPLHLAVKH 334
>05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335
Length = 377
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3
Query: 226 PRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 116
P+ VR V R +TVP+ +TD A G EK E E E
Sbjct: 120 PKFVR-VLRPKTVPIRYTDTFASGTVALEKELEKEFE 155
>04_04_0977 +
29851086-29851463,29852054-29852551,29853665-29853754,
29854369-29854491
Length = 362
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -2
Query: 638 PASYLVVELPAGALRGNELSVRHGAVVPREVAALHAAAQQRPQRLQHRAAR 486
PAS+L AG G E V+ A EV L AQQ +R + R AR
Sbjct: 32 PASFLFGNNNAGGAAGTETRVQVAAGAVPEVDQLLKQAQQPGRRKRRRRAR 82
>02_02_0403 - 9866122-9867231
Length = 369
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 82 PRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGR-FDPGARVVPGAAREPRHRPAHS 258
P+H PL R+ S + R RRRQ +AM R F G +V G R A +
Sbjct: 297 PQHPVVPLSDDDRSDSPELPPESVPRRRRRQWRAMPRDFSHGRALVHGGHNNQRRGGAGA 356
Query: 259 -HTLLQDGRWLR 291
H+ RW R
Sbjct: 357 VHSPSSRYRWSR 368
>03_01_0381 - 2960533-2960805
Length = 90
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 217 VRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 116
+R R +TVP+ +TD A G EK E E E
Sbjct: 1 MRRSQRPKTVPIRYTDTFASGTIALEKELEKEFE 34
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/75 (29%), Positives = 30/75 (40%)
Frame = +1
Query: 40 DLACPRADVLARAAPRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGRFDPGARVVP 219
DL R + P PLG CT A LA+ +S+ + A G G+ +P
Sbjct: 129 DLRPGRREDAPGRRPSSTSAPLGPCTLAHEGLAAVLATSKAASKSEAASG----GSSAIP 184
Query: 220 GAAREPRHRPAHSHT 264
A PR P + T
Sbjct: 185 PPATAPRFPPPRAMT 199
>01_03_0303 +
14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 351 PMSQYCKASMWLVWIFRTSSSQPASV-LQKGVTVCWTMTRLTGRAR 217
P+ +YC +W +WI ++ QP V Q+ + W+ GRA+
Sbjct: 816 PLVKYCPPELWRMWI--SNLLQPLFVHCQQALDFSWSSLLREGRAK 859
>04_04_0265 +
24040689-24041051,24041210-24041457,24041845-24042365,
24042433-24042968
Length = 555
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 153 AISVRSELRASASTTAEWRRAMSRSGACQHVS 58
A+S+R+ELR +A+W + M R H +
Sbjct: 185 AMSLRNELRGPRQNSADWYKYMQRGAEAVHAA 216
>03_06_0614 -
35099225-35099461,35099545-35099694,35099919-35100066,
35100152-35100231,35100428-35100594,35100692-35100940,
35101025-35102310,35102423-35102544,35102946-35103272
Length = 921
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -1
Query: 375 LPPTRNEGPMSQYCKASMWLVWIFRTSSSQPASVLQKGVTVCWTMTRLT 229
LP T + G S K S + R SSS +S +QK V+VC T T T
Sbjct: 381 LPRTGHSGRSSGGSKRSFGAKGLIRRSSSF-SSDIQKDVSVCTTTTEQT 428
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 94 PPPLGSCTRARSQLASHRNSS 156
PP LGSC+R R A H N S
Sbjct: 221 PPELGSCSRLRVLKAGHNNLS 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,386,040
Number of Sequences: 37544
Number of extensions: 526828
Number of successful extensions: 2415
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2413
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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