Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A11
(876 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 206 4e-52
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 191 2e-47
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 186 7e-46
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 174 3e-42
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 163 7e-39
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 132 1e-29
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 127 3e-28
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 123 7e-27
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 105 2e-21
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 102 1e-20
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 101 2e-20
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 99 2e-19
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 96 1e-18
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 95 2e-18
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 91 3e-17
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 89 2e-16
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 87 7e-16
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 87 7e-16
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 83 1e-14
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 82 2e-14
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 77 8e-13
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 75 2e-12
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 73 7e-12
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 73 1e-11
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 73 1e-11
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 72 2e-11
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 71 3e-11
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 69 1e-10
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 69 2e-10
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 69 2e-10
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 68 3e-10
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 66 1e-09
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 64 4e-09
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 64 6e-09
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 58 4e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 51 4e-05
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 50 6e-05
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 50 8e-05
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 49 2e-04
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 49 2e-04
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 48 2e-04
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 45 0.003
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 43 0.012
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 42 0.027
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 41 0.036
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 41 0.036
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 40 0.063
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 40 0.083
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 40 0.083
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 40 0.083
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 39 0.19
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 39 0.19
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 39 0.19
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 38 0.25
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 38 0.33
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 38 0.44
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 36 1.4
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 35 2.4
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 35 2.4
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 35 2.4
UniRef50_Q7QQX5 Cluster: GLP_383_10510_7457; n=1; Giardia lambli... 35 3.1
UniRef50_Q4QGN2 Cluster: Putative uncharacterized protein; n=3; ... 35 3.1
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 33 7.2
UniRef50_Q54GR7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 206 bits (504), Expect = 4e-52
Identities = 99/122 (81%), Positives = 104/122 (85%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W+PVTKLGRLV+ KI LE IYLFSLPIK E DFFLG SL D VLK MPVQKQTRAG
Sbjct: 60 WMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAG 119
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 412
QRTRFKAFVA GD G +GLGVKC KEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHT
Sbjct: 120 QRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Query: 413 VP 418
VP
Sbjct: 180 VP 181
Score = 63.3 bits (147), Expect = 8e-09
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLL 518
KVTG+CGSV VRLIPAPRGTGIVSAPVPK LL
Sbjct: 183 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLL 214
Score = 34.3 bits (75), Expect = 4.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1
Query: 523 MAGVQDCYTSARGSXGHLGXF 585
MAG+ DCYTSARG LG F
Sbjct: 216 MAGIDDCYTSARGCTATLGNF 236
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 191 bits (465), Expect = 2e-47
Identities = 86/122 (70%), Positives = 101/122 (82%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
WVPVTKLGRLV+ GKI +E IYL+SLPIK ++ D+FL P LND V+K +PVQKQTRAG
Sbjct: 34 WVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAG 92
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 412
QRTRFKAFV GD G +GLG+KC KEVATAIRGAII+ KLS++P+RRGYWG +G PHT
Sbjct: 93 QRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Query: 413 VP 418
VP
Sbjct: 153 VP 154
Score = 60.1 bits (139), Expect = 7e-08
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +3
Query: 384 GVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQ 521
G + HT + KV+GKCGSVTVRL+PAPRG G+V+APV K LQ
Sbjct: 144 GTALGDPHTVPV-KVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQ 188
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 186 bits (453), Expect = 7e-46
Identities = 91/121 (75%), Positives = 96/121 (79%)
Frame = +2
Query: 56 VPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAGQ 235
+PVTKLG L+ KI LE IYLFSLPIK E DFFLG SL D VLK MPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 236 RTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 415
TRFKAFV GD G +GL VKC KEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 416 P 418
P
Sbjct: 121 P 121
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 174 bits (423), Expect = 3e-42
Identities = 80/126 (63%), Positives = 98/126 (77%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
WVP TKLGRLV+ GKI LE I+LFSLPIK + + F+G L D V+K PVQKQT AG
Sbjct: 50 WVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAG 109
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 412
QR RFKAFV GD G IGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G+PHT
Sbjct: 110 QRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Query: 413 VPWQGH 430
+P + H
Sbjct: 170 IPTKVH 175
Score = 47.6 bits (108), Expect = 4e-04
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +3
Query: 384 GVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLL 518
G E HT KV GKCGSV VRLIPAPRG GIV++ K +L
Sbjct: 161 GSKLGEPHTIPT-KVHGKCGSVHVRLIPAPRGAGIVASGTVKKVL 204
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 163 bits (395), Expect = 7e-39
Identities = 76/121 (62%), Positives = 91/121 (75%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
WVPVTKLGRLV+ GKI +E I+L SLP+K F+ D L P L D V+ PVQKQTRAG
Sbjct: 35 WVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAG 93
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 412
QRTRFKA V GD G +GLG+K KEVA AIR II+AKLSV+P+RRGYWG +G+PH+
Sbjct: 94 QRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHS 153
Query: 413 V 415
+
Sbjct: 154 L 154
Score = 58.0 bits (134), Expect = 3e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQ 521
K TGKCGSVTVRLIPAPRG+GIV++P K LLQ
Sbjct: 157 KTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQ 189
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 132 bits (318), Expect = 1e-29
Identities = 68/95 (71%), Positives = 74/95 (77%), Gaps = 3/95 (3%)
Frame = +2
Query: 185 DXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVL 364
D VLK MPVQKQT AGQRTRF AFVA GD G GLGVKC KEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 365 PVRRGYWGNKIGKPHTVPWQ--GH-RQVWFCNSPA 460
P+R+GYWGNKIGKP+TVP + GH V C PA
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPA 142
Score = 57.6 bits (133), Expect = 4e-07
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLL 518
KVTG CGSV V LIPAPRGTG+VSAPVPK LL
Sbjct: 127 KVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLL 158
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 127 bits (307), Expect = 3e-28
Identities = 64/125 (51%), Positives = 78/125 (62%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W+P T +GRLV+ KI LE I+ FS I+ E D G S+ + VL VQKQTRAG
Sbjct: 21 WIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQKQTRAG 80
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 412
Q+TR KA V GD G +G+G K KE A+AIRGAI AK ++ PVR G W GKPHT
Sbjct: 81 QKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGAQGKPHT 140
Query: 413 VPWQG 427
V +G
Sbjct: 141 VSCKG 145
Score = 45.6 bits (103), Expect = 0.002
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +3
Query: 393 RSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQNGWCTGLLHLS 554
+ + HT S K +GKCG+ V++IPAPRGTGI+S V K + + L LS
Sbjct: 135 QGKPHTVSC-KGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLS 187
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 123 bits (296), Expect = 7e-27
Identities = 60/80 (75%), Positives = 63/80 (78%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W+PVTKLGRLV+ KI LE IYLFSLPIK E DFFLG SL D VLK MPVQKQTRAG
Sbjct: 35 WIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAG 94
Query: 233 QRTRFKAFVAXGDXXGXIGL 292
QRTRFKAFVA GD G +GL
Sbjct: 95 QRTRFKAFVAIGDYNGHVGL 114
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 105 bits (251), Expect = 2e-21
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W+PVTKLGRLV+ KI LE IYLFSLPIK E DFFLG SL D VLK MPVQKQTRAG
Sbjct: 60 WIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAG 119
Query: 233 QRTRFK 250
QRTRFK
Sbjct: 120 QRTRFK 125
Score = 63.3 bits (147), Expect = 8e-09
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLL 518
KVTG+CGSV VRLIPAPRGTGIVSAPVPK LL
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLL 156
Score = 34.3 bits (75), Expect = 4.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1
Query: 523 MAGVQDCYTSARGSXGHLGXF 585
MAG+ DCYTSARG LG F
Sbjct: 158 MAGIDDCYTSARGCTATLGNF 178
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 102 bits (244), Expect = 1e-20
Identities = 46/61 (75%), Positives = 51/61 (83%)
Frame = +2
Query: 236 RTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 415
+ RFKAFVA GD G +G GVKC KE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 416 P 418
P
Sbjct: 121 P 121
Score = 65.3 bits (152), Expect = 2e-09
Identities = 38/76 (50%), Positives = 44/76 (57%)
Frame = +3
Query: 420 GKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQNGWCTGLLHLSSWFXWAPWXILLKPH 599
GKVTG+CGSV VRLIPAPRGTG VSAPVPK LL + S+ A W L +
Sbjct: 122 GKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDD-CYTSARGHTATWGTLPRLL 180
Query: 600 MLPLPRHMPTSLLTCG 647
++ PR S L G
Sbjct: 181 LMRSPRPTAISPLISG 196
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 101 bits (243), Expect = 2e-20
Identities = 53/93 (56%), Positives = 64/93 (68%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
WVP+TKLGRLV+ GKI LE I+ FS+PIK ++ D FL +L + L PVQKQT AG
Sbjct: 64 WVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAG 122
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIR 331
Q+TRFKA+V GD IGLG K KEV AI+
Sbjct: 123 QKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 98.7 bits (235), Expect = 2e-19
Identities = 61/119 (51%), Positives = 73/119 (61%)
Frame = +2
Query: 59 PVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAGQR 238
P +KLG LV+ +I L IYLFSLPIK E D FLG +L D VLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 239 TRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 415
+KA GD G + G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTV 159
Score = 44.4 bits (100), Expect = 0.004
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = +3
Query: 384 GVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLL 518
G S+ HT L KVTG GSV++ LIPAPR T I SAP+PK LL
Sbjct: 150 GSKTSKPHTV-LCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLL 192
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 95.9 bits (228), Expect = 1e-18
Identities = 47/66 (71%), Positives = 50/66 (75%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W+P TKLG LV+ KI LE IYLFSLPIK E DFFLG SL + VLK MPVQKQTRAG
Sbjct: 60 WIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAG 119
Query: 233 QRTRFK 250
Q TRFK
Sbjct: 120 QWTRFK 125
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLL 518
KVTG+CGSV VRL APRGTGIVSAPVPK LL
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLL 156
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 95.5 bits (227), Expect = 2e-18
Identities = 52/120 (43%), Positives = 73/120 (60%)
Frame = -3
Query: 412 GVWLSDLVTPVTSSNX*NRQLSKDNSASNGSGDFLAALHTQTNXTVVVAXGNKXLETCAL 233
GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT+ V V G++ LE L
Sbjct: 23 GVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTL 82
Query: 232 SGTCLFLYRHXL*NXIIQGRAEEEIXXLEXFDW*RKQVNALEFVDFXXANKTAEFGDRNP 53
+GT L L H L + ++Q A+EEI LE F+ R QV+ L+ D A++ + G NP
Sbjct: 83 TGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQLGHWNP 142
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 91.5 bits (217), Expect = 3e-17
Identities = 46/65 (70%), Positives = 48/65 (73%)
Frame = +2
Query: 95 KIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAGQRTRFKAFVAXGDX 274
KI LE IYLFSLPIK E DFFLG SL D VLK MPV+K+TRAGQRTRFKAFVA D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 275 XGXIG 289
G G
Sbjct: 62 NGYAG 66
Score = 37.5 bits (83), Expect = 0.44
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 268 RXXRSYWFGCEVXQGSRHCHSRRYYPC*VVCFTXSKRLLG*QDRKATHRPL 420
R Y EV QG H R ++P + ++RLLG QDR+A HRPL
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPL 109
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 88.6 bits (210), Expect = 2e-16
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W P T +G LV+ GKI ++ ++ +LPI E D L P L V+ VQKQT AG
Sbjct: 13 WKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAG 71
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 406
+ +R+K V G+ G + +G K++ AI+ AI AK++++PVRR G W G+P
Sbjct: 72 EISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCGEP 131
Query: 407 HTVPWQ 424
H++P++
Sbjct: 132 HSLPFK 137
Score = 41.9 bits (94), Expect = 0.021
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLL 518
KV GK GSV V L+PAP+GTG+V V K LL
Sbjct: 137 KVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLL 168
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 86.6 bits (205), Expect = 7e-16
Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W P T+LGRLV G+I + LP+K ++ D+ + P L D V+ Q+ T +G
Sbjct: 5 WTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTDSG 63
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 406
+R + G+ G +G+G KE A AI+ AI AKL+++ ++R G W GKP
Sbjct: 64 RRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKP 123
Query: 407 HTVPW 421
HT+P+
Sbjct: 124 HTLPF 128
Score = 34.7 bits (76), Expect = 3.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 426 VTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQ 521
V GK GSV+V L PAP+G G+ V K +L+
Sbjct: 130 VNGKSGSVSVTLKPAPQGVGLAVGDVVKVILR 161
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 86.6 bits (205), Expect = 7e-16
Identities = 49/125 (39%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W P T++GR+V+ G I + I LP+ E D L P L + VL VQ+ ++G
Sbjct: 16 WEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQRMHKSG 74
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVR--RGYWGNKIGKP 406
+R R++A V G+ G +G+G+ KEV AIR AI AKLS++ VR G W G P
Sbjct: 75 RRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSP 134
Query: 407 HTVPW 421
H++P+
Sbjct: 135 HSIPF 139
Score = 39.9 bits (89), Expect = 0.083
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 432 GKCGSVTVRLIPAPRGTGIVSAPVPKXLL 518
G CGSV V L+PAPRG G+V+ V K +L
Sbjct: 143 GACGSVKVELLPAPRGVGLVAGNVAKAVL 171
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 82.6 bits (195), Expect = 1e-14
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W P T+LG+ V G+ID ++ LP+K E D + P L D VL VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 406
+R +F+ VA G+ G IG +V AI+ AI +AKL+++ V R G W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 407 HTV 415
HTV
Sbjct: 126 HTV 128
Score = 34.7 bits (76), Expect = 3.1
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 405 HTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQ 521
HT +L + GK GSV V L PAPRG G+ + +L+
Sbjct: 126 HTVAL-RTEGKAGSVEVELQPAPRGLGLAGGETVRKVLE 163
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 81.8 bits (193), Expect = 2e-14
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLN----DXVLKXMPVQKQ 220
W P TKLG +V+ G+I + I+ IK E D L P +N VL +
Sbjct: 16 WEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVRM 74
Query: 221 TRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRR--GYWGNK 394
T +G+R RF+ A G+ G +GLG+ KEV AIR AI AKL+++ ++R G W +
Sbjct: 75 TDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWECR 134
Query: 395 IGKPHTVPW 421
+PH+VP+
Sbjct: 135 CRRPHSVPF 143
Score = 38.7 bits (86), Expect = 0.19
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3
Query: 426 VTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQ 521
V GK GSV VRLIP PRG G+V V K +L+
Sbjct: 145 VEGKEGSVRVRLIPGPRGLGLVIGDVGKKILR 176
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 76.6 bits (180), Expect = 8e-13
Identities = 43/93 (46%), Positives = 56/93 (60%)
Frame = +2
Query: 83 VRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAGQRTRFKAFVA 262
V+ K+ L+ +YLFSLPIK FE DF LG L D VLK M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 263 XGDXXGXIGLGVKCXKEVATAIRGAIILAKLSV 361
D + LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 74.9 bits (176), Expect = 2e-12
Identities = 43/109 (39%), Positives = 60/109 (55%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W P T+LGR V+ G I +E LP+K E D L P L D VL VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRG 379
+R +F+ VA G+ G +G +V AI+ AI +AKL+++ V RG
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRG 165
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQ 521
K GK GSVTV + PAP+G G+ +A + +L+
Sbjct: 182 KAEGKAGSVTVEIQPAPQGLGLAAAETVRNILE 214
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 73.3 bits (172), Expect = 7e-12
Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
WVP T LG+ V G+I LE I L I+ L P L V+ +QK T G
Sbjct: 46 WVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNG 104
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 406
Q TRFKA VA G+ G +G+G K++ AI A A L+V P++ G W + +
Sbjct: 105 QSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECRCDQK 164
Query: 407 HTVPWQ 424
H+VP++
Sbjct: 165 HSVPFK 170
Score = 41.1 bits (92), Expect = 0.036
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQ 521
KV GK GSVT+ +IPAPRG G+V+ K LL+
Sbjct: 170 KVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLE 202
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 72.5 bits (170), Expect = 1e-11
Identities = 51/122 (41%), Positives = 64/122 (52%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W+P+TKLG LV+ KI LE IY FSL + F P+ KQT
Sbjct: 54 WLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSW----------EHPLIKQTCTD 103
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 412
Q+TRFKA V G G + LG+K EV AIILAKLS++PV G ++ +PH
Sbjct: 104 QQTRFKASVTVGS-YGHVSLGIKYSMEV------AIILAKLSIIPVETATGGKRL-EPHM 155
Query: 413 VP 418
VP
Sbjct: 156 VP 157
Score = 60.1 bits (139), Expect = 7e-08
Identities = 30/49 (61%), Positives = 34/49 (69%)
Frame = +3
Query: 381 TGVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQNG 527
TG R E H +VTG+CGS+ V LIPAPRGTG VSAPVPK L+ G
Sbjct: 146 TGGKRLEPHMVPC-RVTGRCGSLLVHLIPAPRGTGTVSAPVPKLLMMAG 193
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 72.5 bits (170), Expect = 1e-11
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Frame = +2
Query: 80 LVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAGQRTRFKAFV 259
+V GKI E LPI+ E D L P L+D VL +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 260 AXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVP 418
G+ G +GL + KEVA+ IR AI AKL+++PV R G W + G +VP
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVP 114
Score = 33.1 bits (72), Expect = 9.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLL 518
K+TG+ GS V L+PAP G G+V + + +L
Sbjct: 116 KITGRSGSTRVTLMPAPAGKGLVVSDYGRRVL 147
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 72.1 bits (169), Expect = 2e-11
Identities = 44/124 (35%), Positives = 72/124 (58%)
Frame = -3
Query: 424 LPRDGVWLSDLVTPVTSSNX*NRQLSKDNSASNGSGDFLAALHTQTNXTVVVAXGNKXLE 245
L GV L+ + TPVTSS+ N QL D++ S+G+ +FL+ L+TQT+ TV V + LE
Sbjct: 100 LGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLE 159
Query: 244 TCALSGTCLFLYRHXL*NXIIQGRAEEEIXXLEXFDW*RKQVNALEFVDFXXANKTAEFG 65
+ +L+ + L L R + N I+Q ++ + LE DW R Q + + D +++ + G
Sbjct: 160 SGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFLDWQRVQEDFFDGRDLAGLHQSTQLG 218
Query: 64 DRNP 53
+ NP
Sbjct: 219 NWNP 222
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 71.3 bits (167), Expect = 3e-11
Identities = 53/118 (44%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Frame = +2
Query: 56 VPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAGQ 235
+PVTKLG LV+ KI L P+K FE DFFL SL D VLK +P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 236 RTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKP 406
TRF +F + G G+GVKC K+V TA+ + + L S LP R Y GN I KP
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP 106
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 69.3 bits (162), Expect = 1e-10
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
WVP T LG+ V G+I LE I I+ L P L V+ +QK T G
Sbjct: 27 WVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKMTSNG 85
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 406
Q TRFKA VA G+ G +G+G K++ AI A A L+V P++ G W + +
Sbjct: 86 QSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECRCDQK 145
Query: 407 HTVPWQ 424
H+VP++
Sbjct: 146 HSVPFK 151
Score = 37.1 bits (82), Expect = 0.58
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQ 521
KV GK GSV + ++PAPRG G+V+ + LL+
Sbjct: 151 KVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLE 183
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 68.9 bits (161), Expect = 2e-10
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPV------- 211
W P TKLGRLV+ GKI ++ I I+ E D L P+L +K +
Sbjct: 7 WQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFRSK 65
Query: 212 ------QKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVR 373
QK+T G +TR++ GD G +G+G+ ++ A AI AKL+++ V
Sbjct: 66 KPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVA 125
Query: 374 R--GYWGNKIGKPHTVPWQ 424
R G W G PH++P+Q
Sbjct: 126 RGCGSWECACGAPHSIPYQ 144
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/106 (31%), Positives = 60/106 (56%)
Frame = +2
Query: 107 LEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXI 286
L+ ++L + + + G SL V++ + V + T++G++ + K V GD G +
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 287 GLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPWQ 424
GLGVK + I+ A+ AKL++ +RRGYW + GKP+T+ ++
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYK 189
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 423 KVTGKCGSVTVRLIPAPRGTGIVSA 497
K +GK GSV V + PAP+GTGIV++
Sbjct: 189 KTSGKAGSVVVCIKPAPKGTGIVAS 213
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 68.1 bits (159), Expect = 3e-10
Identities = 38/68 (55%), Positives = 45/68 (66%)
Frame = +2
Query: 212 QKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGN 391
+K+T AGQ+TRFKAFV D G + L EVATAIRGAIIL + S+ G+ GN
Sbjct: 19 KKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGAIILDRSSIAIAWGGWSGN 72
Query: 392 KIGKPHTV 415
KI KPHTV
Sbjct: 73 KIAKPHTV 80
Score = 39.1 bits (87), Expect = 0.14
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3
Query: 396 SESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQ 521
++ HT S +VT SV V I APRGT I+SAPVPK LL+
Sbjct: 75 AKPHTVSC-RVTRLYCSVLVHHISAPRGTDILSAPVPKKLLR 115
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 65.7 bits (153), Expect = 1e-09
Identities = 50/122 (40%), Positives = 59/122 (48%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
WV + LG LV+ KI LE FS + +FFLG L D VL+ M Q Q
Sbjct: 24 WVFINNLGCLVKE-KIKSLESCSPFSSS----DIIEFFLGEHLKDEVLRTMLAQNQ---- 74
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 412
RTR K F L V C KEV TA + AI L + + GY GNKIG PHT
Sbjct: 75 -RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNKIGNPHT 131
Query: 413 VP 418
+P
Sbjct: 132 IP 133
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 64.1 bits (149), Expect = 4e-09
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = +2
Query: 95 KIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAGQRTRFKAFVAXGDX 274
KI L+ +YLFS PIK FE DF L L D VLK M V+KQ AG+ RFK V
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 275 XGXIGLGVKCXKEVATAIRGAIIL 346
+ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 63.7 bits (148), Expect = 6e-09
Identities = 33/74 (44%), Positives = 44/74 (59%)
Frame = +2
Query: 59 PVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAGQR 238
PVTKLGRLV+ GK+ ++ I+ F + IK ++ D L L + V+ VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 239 TRFKAFVAXGDXXG 280
R KA VA GD G
Sbjct: 95 PRLKASVAIGDHNG 108
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 57.6 bits (133), Expect = 4e-07
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = +2
Query: 212 QKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKL 355
QKQT+ GQ+ R K F GD G +GLG+KC KEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
Score = 49.6 bits (113), Expect = 1e-04
Identities = 28/47 (59%), Positives = 28/47 (59%)
Frame = +3
Query: 384 GVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQN 524
G TR T KVT GSV V LIPAPRGTGIVSAPV L N
Sbjct: 49 GETRLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMN 95
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 50.8 bits (116), Expect = 4e-05
Identities = 39/92 (42%), Positives = 45/92 (48%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W+PV KL LVR + L FSL K FFL SL D + MPVQ QT
Sbjct: 63 WMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDEI---MPVQTQTWLP 115
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAI 328
R FK FV+ D + L KC K+ ATAI
Sbjct: 116 SRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI 146
Score = 39.1 bits (87), Expect = 0.14
Identities = 26/46 (56%), Positives = 29/46 (63%)
Frame = +3
Query: 381 TGVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLL 518
T TR S T S KVTG+C SV + LIP R I+SAPVPK LL
Sbjct: 153 TRETRLGSLTVSC-KVTGQCVSVLICLIPPTR--NIISAPVPKKLL 195
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 50.4 bits (115), Expect = 6e-05
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIK 142
W+PVTKLGRLV+ KI LE IYLFSLPIK
Sbjct: 60 WMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 50.0 bits (114), Expect = 8e-05
Identities = 27/38 (71%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 417 LGKVTGKCGSVTVRLIPAPRGTGIVSAPVP-KXLLQNG 527
L KVTG CGSV V LIPA RGTGI SAPVP K L+ G
Sbjct: 17 LCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAG 54
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 170 GPSLNDXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILA 349
GP + VL+ + K + G+ F+A VA GD G IGLG KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 350 KLSVL--PVRRGY 382
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 48.8 bits (111), Expect = 2e-04
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFF 166
W PVTKLGRLV+ GK+ ++ I+ F + IK FE D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = -3
Query: 508 LGTGADTIPVPRGAGISRTVTEPHLPVTLPRDGVWLSDLVTPVTSSNX*NRQLSKDNSAS 329
LGT A+ +PVP GAG+ T TEP P+TL L+ PV S++ N +L + +++
Sbjct: 37 LGTEAEVMPVPMGAGMKSTRTEPQWPITL-CGLCGACCLLPPVASTHRDNGKLGQSDNSL 95
Query: 328 NGSGDFLAA 302
+G G+ L A
Sbjct: 96 DGRGNLLGA 104
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +2
Query: 158 DFFLGPSLNDXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGA 337
DF G + + +++ V K + G+ F+ G+ G +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 338 IILAKLSVLPV 370
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +2
Query: 185 DXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVL 364
+ +LK V K T+ G+ F A GD G IGLG+ V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 365 PV 370
+
Sbjct: 71 KI 72
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 41.5 bits (93), Expect = 0.027
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2
Query: 179 LNDXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLS 358
L + V+ V K + G+R RF A V GD G +G G +EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 359 VLPV 370
++ V
Sbjct: 72 LISV 75
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 41.1 bits (92), Expect = 0.036
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 179 LNDXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLS 358
L + ++ + K T+ G+ RF A GD G +G G+ EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 359 VLPVR 373
+ V+
Sbjct: 138 MYKVK 142
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 41.1 bits (92), Expect = 0.036
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +2
Query: 185 DXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVL 364
+ V++ V K + G++ +F+A V GD G +G+G KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 365 PV 370
V
Sbjct: 209 QV 210
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 40.3 bits (90), Expect = 0.063
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 215 KQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVL--PVRRG 379
K + G+R RF A V GD G +G+G+ KEV AI A +A+ +++ PV G
Sbjct: 29 KTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMITVPVENG 85
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 39.9 bits (89), Expect = 0.083
Identities = 41/127 (32%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Frame = +2
Query: 53 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKXFEXXDFFLGPSLNDXVLKXMPVQKQTRAG 232
W+ +T L L + KI E + LF P K F G SL D ++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 233 QRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 403
QRT+ G GL C EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 404 PHTVPWQ 424
P P Q
Sbjct: 141 PSVCPMQ 147
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +2
Query: 185 DXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVL 364
+ V++ V K + G++ F+A V GD G +G+GV KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 365 PV 370
V
Sbjct: 246 TV 247
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +2
Query: 185 DXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVL 364
+ +++ K T+ G+ F+ G+ G +GLG+ +EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 365 PV 370
V
Sbjct: 77 EV 78
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 38.7 bits (86), Expect = 0.19
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3
Query: 465 PAPRGTGIVSAPVPKXLL 518
PAPRGTGIVSAPVPK LL
Sbjct: 1 PAPRGTGIVSAPVPKKLL 18
Score = 34.3 bits (75), Expect = 4.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1
Query: 523 MAGVQDCYTSARGSXGHLGXF 585
MAG+ DCYTSARG LG F
Sbjct: 20 MAGIDDCYTSARGCTATLGNF 40
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 38.7 bits (86), Expect = 0.19
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = -1
Query: 198 FRTXSFRDGPRKKSXXSNXLIGKENK*MXSSLSIXPXRTRRPSLVTGTH 52
F T S + G K S N L GKE K + S + I P T PSLVTGTH
Sbjct: 2 FMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTH 49
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 38.7 bits (86), Expect = 0.19
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 170 GPSLNDXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILA 349
G L + ++ V K + G+R F A V GD G +G G +EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 350 KLSVL--PVRRG 379
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 38.3 bits (85), Expect = 0.25
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +2
Query: 182 NDXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSV 361
++ V+K V K + G+R F A GD G +G+G EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 362 LPVRRGYWGNKIGKPHTV 415
V+ + G+ I PH V
Sbjct: 91 --VKINFKGHTI--PHEV 104
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 37.9 bits (84), Expect = 0.33
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 185 DXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAK--LS 358
D ++ V K + G+R F A V GD G +G G +EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 359 VLPVRRG 379
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 37.5 bits (83), Expect = 0.44
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 185 DXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGA 337
+ ++K V K T+ G++ F+A V GD G +G+GV ++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 35.9 bits (79), Expect = 1.4
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +2
Query: 221 TRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPV 370
T+ G+R F V GD G +G G KEV AI I AK +V+ V
Sbjct: 42 TKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRV 91
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 35.1 bits (77), Expect = 2.4
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 185 DXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVL 364
+ V++ V K + G++ F+A V G+ G +G+GV +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 365 PV 370
V
Sbjct: 79 EV 80
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 35.1 bits (77), Expect = 2.4
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 209 VQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVLPV 370
V K + G+R F A V GD G +G+G KEV AI + A+ S V
Sbjct: 52 VSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFFRV 105
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 185 DXVLKXMPVQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAKLSVL 364
+ V++ V K + G++ F+A + GD G +G+GV +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 365 PV 370
V
Sbjct: 128 RV 129
>UniRef50_Q7QQX5 Cluster: GLP_383_10510_7457; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_10510_7457 - Giardia lamblia
ATCC 50803
Length = 1017
Score = 34.7 bits (76), Expect = 3.1
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = -3
Query: 646 PQVRSEVGICLGNGSICGFSKXSQGAQXNHEL-RCSSP-VHQPF*RSXLGTGADTIPVPR 473
P++R E+ +GS+CG + SQ + R +SP + + RS + + ++P+PR
Sbjct: 318 PEIREELRAASRSGSLCGSNYGSQSMNTSRSASRSASPSISRTASRSISRSASPSLPIPR 377
Query: 472 GAGISRTVTEPHLPVTLPRD 413
IS TV P+ +P D
Sbjct: 378 --AISITVDR---PINIPTD 392
>UniRef50_Q4QGN2 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1025
Score = 34.7 bits (76), Expect = 3.1
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 399 ESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKXLLQNGW-CTGLL 545
E H + K G+ T L+P PR + P+P L N W C LL
Sbjct: 476 EGHAATTTATAAKAGTRTSPLLPPPRTNAGATPPIPAAALSNAWECFSLL 525
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 33.5 bits (73), Expect = 7.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 209 VQKQTRAGQRTRFKAFVAXGDXXGXIGLGVKCXKEVATAIRGAIILAK 352
V K + G+R F A V GD G +G G+ +V AIR + A+
Sbjct: 26 VAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q54GR7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1504
Score = 33.1 bits (72), Expect = 9.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 485 SSTTRGRNQPDCYRTTLAGDLAKGRCVAFRSC 390
+STT G + PDC + + G ++G CVA +C
Sbjct: 1148 TSTTTGTSGPDCSKLSNCGGSSQGNCVADNTC 1179
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,924,784
Number of Sequences: 1657284
Number of extensions: 12044297
Number of successful extensions: 26100
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 25086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26066
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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