Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A08
         (875 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   4.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   4.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   4.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.6  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 814 GPPXXXPVIPPFLHXT 861
           GPP    + PP LH T
Sbjct: 94  GPPIHHQIRPPILHDT 109


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 814 GPPXXXPVIPPFLHXT 861
           GPP    + PP LH T
Sbjct: 94  GPPIHHQIRPPILHDT 109


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 528 CWFCLWSHRMQFCCGFV 478
           C F +++  + FCC F+
Sbjct: 171 CAFIIFTMHLLFCCAFI 187


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 814 GPPXXXPVIPPFLHXT 861
           GPP    + PP LH T
Sbjct: 94  GPPIHHQIRPPILHDT 109


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 814 GPPXXXPVIPPFLHXT 861
           GPP    + PP LH T
Sbjct: 94  GPPIHHQIRPPILHDT 109


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 535 TFLLVLSLESPNAILLWFCWSINLRA*XSLLFMSLTV 425
           T+L+    E  +  +LW C S N      +L +S TV
Sbjct: 242 TYLIWTIYEMYHLAILWSCTSTNCPRFLIMLALSYTV 278


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 555  VLENNRVYFKIMSTEDQQYLKLDNTK 632
            ++E   VY+K +ST+D+  +K  + K
Sbjct: 1230 IVEYYTVYYKPVSTDDKTEVKPTSQK 1255


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +1

Query: 517 TKPARKSPGSLPPCWKTTEFTSRSCP 594
           T PA   PG LP  W+     S   P
Sbjct: 52  TNPAFFHPGLLPLAWQANSPPSPPAP 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,823
Number of Sequences: 336
Number of extensions: 2888
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)