Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A08
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81062-8|CAD59145.1|  808|Caenorhabditis elegans Hypothetical pr...    35   0.088
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    33   0.35 
AF047659-5|AAC04429.1|  347|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z93391-7|CAB07685.3|  405|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z81062-8|CAD59145.1|  808|Caenorhabditis elegans Hypothetical
           protein F15A4.8b protein.
          Length = 808

 Score = 34.7 bits (76), Expect = 0.088
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 502 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLXMTVSSTVIAPXT- 678
           +VT  T        ++P    TT   S + PP  ++T + +T+      V ST IAP T 
Sbjct: 407 NVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTM 466

Query: 679 PSNTXGT 699
           PS T  T
Sbjct: 467 PSTTEKT 473


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 511 PKTKPARKSPGSLPPCWKTTE--FTSRSCPPRTNST 612
           PKT+P    P ++P CW+     F     PPR N+T
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNT 453


>AF047659-5|AAC04429.1|  347|Caenorhabditis elegans Hypothetical
           protein K07H8.8 protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = +3

Query: 324 GTPWXFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDXHALKLIDQQNHNKIAF 503
           G    FA Q W  D K  +K+   IQ+    TE+   + N       + + ++N N++  
Sbjct: 239 GADTHFAPQTWYCDMKNNIKNSTVIQYSSTGTEKIKMIDNLLTVFKNRNVPEENLNEVRE 298

Query: 504 GDSKDKTSKKVS 539
             SK KT    S
Sbjct: 299 ELSKGKTQHSTS 310


>Z93391-7|CAB07685.3|  405|Caenorhabditis elegans Hypothetical
           protein W04G5.9 protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 450 DXHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRV-YFKIMSTEDQQY 611
           D   ++ I   N N++ FG         +SW+F   L NN++    I   +D++Y
Sbjct: 281 DVKNIRRIRDTNTNEVYFGLVDGADHGTISWRFDKDLNNNKIGRVDIEVRDDEEY 335


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,368,001
Number of Sequences: 27780
Number of extensions: 277244
Number of successful extensions: 816
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)