Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A08
         (875 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g77240.1 68414.m08996 AMP-binding protein, putative strong si...    29   3.1  
At5g06800.1 68418.m00768 myb family transcription factor contain...    29   4.1  
At1g47310.1 68414.m05238 expressed protein                             29   4.1  
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A...    29   5.4  
At3g29080.1 68416.m03641 hypothetical protein                          28   7.1  
At2g39650.1 68415.m04862 expressed protein contains Pfam profile...    28   9.4  

>At1g77240.1 68414.m08996 AMP-binding protein, putative strong
           similarity to AMP-binding protein GI:1903034 from
           [Brassica napus]; contains Pfam AMP-binding domain
           PF00501
          Length = 545

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +3

Query: 378 VKSYFPIQFRVIFTEQTVKLINKR-DXHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTP 554
           V S + +QF V  +   +  IN R D HAL ++ + + +K+ F D    +    +  F P
Sbjct: 76  VPSVYELQFAVPMSGAVLNNINPRLDAHALSVLLRHSESKLVFVDHHSSSLVLEAVSFLP 135

Query: 555 VLENNRV 575
             E  R+
Sbjct: 136 KDERPRL 142


>At5g06800.1 68418.m00768 myb family transcription factor contains
           Pfam profile: PF00249 myb-like DNA-binding domain
          Length = 375

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 512 QRQNQQESLLEVYPRVGKQQSLLQDHVHRGPT 607
           Q+Q  +ESLL+  P      SLL  H+H  P+
Sbjct: 319 QQQKNKESLLKKLPDAEASLSLLDPHIHSPPS 350


>At1g47310.1 68414.m05238 expressed protein
          Length = 395

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = +3

Query: 417 TEQTVKLINKRDXHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMST 596
           T QTV  +  +   A  ++  Q   + + G ++   SKKV+W+  P +E  RV+F++ + 
Sbjct: 286 TRQTVSSVTAK-LKASGMVRFQLEIERSIGKNESVISKKVAWRTKPKIE--RVWFEVTAK 342

Query: 597 EDQQYLK 617
            +   LK
Sbjct: 343 IEGDKLK 349


>At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A19)
           Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis
           thaliana]; similar to cytochrome P450LXXIA1, Persea
           americana, M32885
          Length = 490

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 461 GVXVPFVYELDSLLGEDHSKLDGEVRFDDFL 369
           G  +P +  +D + G+DH   + + RFD+FL
Sbjct: 221 GEYIPSLSWIDKIRGQDHKMEEVDKRFDEFL 251


>At3g29080.1 68416.m03641 hypothetical protein
          Length = 445

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 262 EGKEGXGYQGSREASDRKRQEEXHGXSPTSYGXRMERK 375
           E +EG GY    EA D +R+ +    S ++ G   ERK
Sbjct: 395 EAEEGSGYHQRWEALDSRRKHDHSRTSGSALGTGTERK 432


>At2g39650.1 68415.m04862 expressed protein contains Pfam profile
           PF04720: Protein of unknown function (DUF506)
          Length = 291

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 617 LQVLLVLGGHDLEVNSVVFQHGGKLPG 537
           L  LL L G+D  V S  +Q GGK+PG
Sbjct: 114 LAKLLRLSGYDAAVCSARWQGGGKVPG 140


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,779,210
Number of Sequences: 28952
Number of extensions: 266286
Number of successful extensions: 759
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2058178400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)