Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A05
         (874 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   3.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.6  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -3

Query: 383 GNAGPGQAQPXPVYVVQSEPCGGSAE 306
           G+ G G   P P    Q  P GG  E
Sbjct: 9   GHTGGGLMPPQPYMNAQDAPAGGENE 34


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 319 EAALSLWRSLKSADPMALSTF 257
           E  L+ W+  KSA+ +A+  F
Sbjct: 372 EVNLTCWQDTKSANKIAMKLF 392


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +3

Query: 714 PXWDSPSRNSSKKYYAXAVXXXS 782
           P W SP   S   Y+A AV   S
Sbjct: 275 PQWPSPIGASHLPYFAAAVAAAS 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,919
Number of Sequences: 336
Number of extensions: 1887
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)