Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A04
(867 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 316 2e-86
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 316 2e-86
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 268 3e-72
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 2e-48
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 160 1e-39
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 9e-28
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 99 2e-21
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 5e-08
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 30 2.1
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 30 2.8
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 29 3.7
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.9
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.9
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 6.5
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 28 8.6
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 28 8.6
SB_31091| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 316 bits (776), Expect = 2e-86
Identities = 151/190 (79%), Positives = 168/190 (88%)
Frame = +1
Query: 256 SYVAFTDTERLIGDAAKNXVAMNPNNTIFDAKRLIGRKFEDATVQADMKXWPFEVVSDGG 435
SYVAF+DTERLIGDAAKN VAMNP NT+FDAKRLIGRKF+D V DM WPF V+ +G
Sbjct: 40 SYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGE 99
Query: 436 XPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 615
PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATK
Sbjct: 100 RPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK 159
Query: 616 DAGTISGLNVLRIINEPTAAAIAYGLDQKGTGXRHVLIFDLGGGTFDVSILTIEDGIFXV 795
DAGTI+GLNVLRIINEPTAAAIAYGLD+K R+VLI+DLGGGTFDVS+LTIEDGIF V
Sbjct: 160 DAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEV 219
Query: 796 KSTAGDTHLG 825
KSTAGDTHLG
Sbjct: 220 KSTAGDTHLG 229
Score = 80.6 bits (190), Expect = 2e-15
Identities = 36/39 (92%), Positives = 36/39 (92%)
Frame = +3
Query: 138 MAKAPAVGIDLGTXYSCVGVFQHGKVEXIANDQGNRTTP 254
MAK PAVGIDLGT YSCVGVFQHGKVE IANDQGNRTTP
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTP 39
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 316 bits (776), Expect = 2e-86
Identities = 150/191 (78%), Positives = 172/191 (90%), Gaps = 1/191 (0%)
Frame = +1
Query: 256 SYVAFTDTERLIGDAAKNXVAMNPNNTIFDAKRLIGRKFEDATVQADMKXWPFEVVSDGG 435
SYV FTDTERL+GDAAKN VA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD
Sbjct: 40 SYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNN 99
Query: 436 XPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 615
PKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATK
Sbjct: 100 KPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATK 159
Query: 616 DAGTISGLNVLRIINEPTAAAIAYGLDQKGTGXRHVLIFDLGGGTFDVSILTIEDG-IFX 792
DAGTI+GLNVLR+INEPTAAA+AYGLD+ +G ++VLIFDLGGGTFDVSILTI+DG +F
Sbjct: 160 DAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFE 219
Query: 793 VKSTAGDTHLG 825
VKSTAGDTHLG
Sbjct: 220 VKSTAGDTHLG 230
Score = 77.4 bits (182), Expect = 1e-14
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +3
Query: 138 MAKAPAVGIDLGTXYSCVGVFQHGKVEXIANDQGNRTTP 254
M KAPA+GIDLGT YSCVGVFQ+GKVE IANDQGNRTTP
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTP 39
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 268 bits (658), Expect = 3e-72
Identities = 129/191 (67%), Positives = 158/191 (82%), Gaps = 1/191 (0%)
Frame = +1
Query: 256 SYVAFTDT-ERLIGDAAKNXVAMNPNNTIFDAKRLIGRKFEDATVQADMKXWPFEVVSDG 432
SYVAFT+ ERLIGD AKN + NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV
Sbjct: 737 SYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKN 796
Query: 433 GXPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAT 612
P ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+QRQAT
Sbjct: 797 KKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQAT 856
Query: 613 KDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGXRHVLIFDLGGGTFDVSILTIEDGIFX 792
KDAG I+GL V+RIINEPTAAAIAYG+D+K G +++L+FDLGGGTFDVS+LTI++G+F
Sbjct: 857 KDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFE 915
Query: 793 VKSTAGDTHLG 825
V +T GDTHLG
Sbjct: 916 VVATNGDTHLG 926
Score = 62.1 bits (144), Expect = 6e-10
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +3
Query: 156 VGIDLGTXYSCVGVFQHGKVEXIANDQGNRTTP 254
+GIDLGT YSCVGVF++G+VE IANDQGNR TP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITP 736
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 189 bits (461), Expect = 2e-48
Identities = 93/112 (83%), Positives = 101/112 (90%)
Frame = +1
Query: 490 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 669
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 670 AAAIAYGLDQKGTGXRHVLIFDLGGGTFDVSILTIEDGIFXVKSTAGDTHLG 825
AAAIAYGLD+K R+VLIFDLGGGTFDVS+L+IEDGIF VKST GDTHLG
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLG 322
Score = 180 bits (438), Expect = 1e-45
Identities = 97/148 (65%), Positives = 106/148 (71%), Gaps = 25/148 (16%)
Frame = +1
Query: 256 SYVAFTDTERLIGDAAKNXVAMNPNNTIFDAKRLIGRKFEDATVQADMKXWPFEVVSDGG 435
SYVAFTD ERL+GDAAKN VAMNP NTIFDAKRLIGR+F+D V+ DMK W FEVV++ G
Sbjct: 40 SYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAG 99
Query: 436 XPKIKVAYKGEDKTFFPEEV-------------------------SSMVLTKMKETAEAY 540
PK+KV YKGE KTFF EEV SSMVL KMKETAEAY
Sbjct: 100 RPKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAY 159
Query: 541 LGKTVQNAVITVPAYFNDSQRQATKDAG 624
LG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 160 LGCKVTDAVVTVPAYFNDSQRQATKDAG 187
Score = 80.2 bits (189), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 138 MAKAPAVGIDLGTXYSCVGVFQHGKVEXIANDQGNRTTP 254
M KAPA+GIDLGT YSCVGVFQHGKVE IANDQGNRTTP
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTP 39
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 160 bits (389), Expect = 1e-39
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
Frame = +1
Query: 256 SYVAFTDTERLIGDAAKNXVAMNPNNTIFDAKRLIGRKFEDATVQADMKXWPFEVVSDG- 432
S VAFTD L+G+ A + +NP NTI+DAKR IG+ F + K + F V +D
Sbjct: 69 SLVAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKR 128
Query: 433 GXPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAT 612
G V KG PEE+ V+ K++ AE L TV AV++VPA F+ QR AT
Sbjct: 129 GNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNAT 188
Query: 613 KDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGXRHVLIFDLGGGTFDVSILTIEDGIFX 792
A +++G+ VLR+INEPTAAA+AYGL +K G +V++ DLGGGT DVS+L I+ G+F
Sbjct: 189 VKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFV 247
Query: 793 VKSTAGDTHLG 825
+ AG+ LG
Sbjct: 248 TMAMAGNNRLG 258
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 144 KAPAVGIDLGTXYSCVGVFQ--HGKVEXIANDQGNRTTPXL 260
K +GIDLGT YSCVG +Q G+++ +++ ++ P L
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSL 70
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 121 bits (291), Expect = 9e-28
Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 4/172 (2%)
Frame = +1
Query: 322 NPNNTIFDAKRLIGRKFEDATVQADMKXWPFEVVS-DGGXPKIKVAYKGEDKTFFPEEVS 498
N NTI KR IGRKF D VQ ++ P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 499 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 678
+M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA +
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237
Query: 679 IAYGL---DQKGTGXRHVLIFDLGGGTFDVSILTIEDGIFXVKSTAGDTHLG 825
+AYG+ D R+V+ D+G + V I G V STA + +LG
Sbjct: 238 LAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLG 289
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 156 VGIDLGTXYSCVGVFQHGKVEXIANDQGNRTTP 254
VG D+G + V + G +E +AN+ +R TP
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTP 36
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 99 bits (238), Expect = 2e-21
Identities = 59/113 (52%), Positives = 75/113 (66%), Gaps = 24/113 (21%)
Frame = +1
Query: 445 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 624
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 625 TISGLN------------------------VLRIINEPTAAAIAYGLDQKGTG 711
TI+GL+ VLRIINEPTAAAIAYGLD+ G
Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGG 114
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 76.2 bits (179), Expect = 3e-14
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = +1
Query: 439 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 618
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 619 AGTISGLNVLRIINEPTAAAIAYGLDQK----GTGXRHVLIFDLGGGTFDVSIL 768
A + GLNVL+I+N TA A+ YGL Q+ T +H + +D+G + +I+
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIV 180
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 55.6 bits (128), Expect = 5e-08
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +1
Query: 721 VLIFDLGGGTFDVSILTIEDGIFXVKSTAGDTHLG 825
+ ++DLGGGTFD+SIL I+ G+F VK+T GDT+LG
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLG 36
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 721 VLIFDLGGGTFDVSILTIEDGIFXVK 798
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -2
Query: 533 SAVSFIFVSTMELTSSGKKVLSSPLXATLILGXPPSLTTSKGQXFMSACTVASSNLRPMR 354
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 353 RLASNIVL 330
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1
Query: 199 SSTGRWXSSPTTRATGPLRSYVAFTDTERLIGDAAKNXVAMNPNNTIFDAKRLIGRKFED 378
+ TG+ ++ TG R+ A T + + AKN + NP N + + L FED
Sbjct: 395 NQTGQNPTNQAENQTGQNRTNQAKNQTGQNPTNQAKNQIGQNPTNHAKNQRYLKSIVFED 454
Query: 379 ATVQAD 396
+ ++ D
Sbjct: 455 SLIRND 460
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 727 IFDLGGGTFDVSILTIEDGIFXV 795
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 343 RILCCWGSSPPGSWRH 296
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 343 RILCCWGSSPPGSWRH 296
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 734 TSAAVPSTCPSLPSRMVSSR*NPPPATP 817
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +1
Query: 505 VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 654
V K T+E Y+G T + NA +T+P YF + +K G G+ +
Sbjct: 994 VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051
Query: 655 INEPTAAAIAYGLDQKGTG 711
+++ I+Y LD+K TG
Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 14/95 (14%)
Frame = +3
Query: 468 RQNLFPRGSQFHGAYENEGNCRSLSRQNCAECSY---HG----SRVLQ*LSKTSHKRCRY 626
R+++FP+G H +Y C L R S+ HG S L+ K + C +
Sbjct: 1366 RRHVFPKGHVAHRSYHVYSICALLRRYRLTHSSFLLHHGQTGNSGTLRSFCKFIMRECGW 1425
Query: 627 HLRLERSPN---HQ*T----HCCCDCLRS*PKGYW 710
+R HQ CCC C R YW
Sbjct: 1426 RVRAGTDACVIFHQFDDAIRECCCLCCRGRRGKYW 1460
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 84 HVC*VVLXTSNKXD*KYKMAKAPAVGIDL 170
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_31091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 728 SLTSAAVPSTCPSLPSRMVSSR*NPPPATPTWXGEDFDQSHGD 856
++ S V P++P + S+ PPP+ + EDFD D
Sbjct: 34 TVISEPVAPPMPTVPIQTPSAPYQPPPSNDYYDAEDFDDDWDD 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,868,870
Number of Sequences: 59808
Number of extensions: 535383
Number of successful extensions: 1400
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2479240863
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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