Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A03
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,426...    32   0.66 
03_01_0525 + 3952095-3952217,3953131-3953614,3953695-3953750,395...    28   8.1  

>03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,
            4262554-4262718,4262811-4263178,4263225-4263861,
            4263952-4265844,4266325-4266672
          Length = 1482

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -2

Query: 563  SLCXSGAXQGSENADIDSTRLSTRQPSRVM*VILSVPQTGLYSAVTGQL 417
            +LC  G+  G+ N  +D       + S++M VIL + Q  +Y A T  L
Sbjct: 1108 ALCAQGSVVGTFNRALDGPAAKASRRSQLMGVILGLSQGAMYGAYTATL 1156


>03_01_0525 +
           3952095-3952217,3953131-3953614,3953695-3953750,
           3953942-3954018,3954862-3954958,3955274-3955407,
           3955760-3955825,3955954-3956044
          Length = 375

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -1

Query: 453 TNWIVLSGYWAATNALLNCRRHCGGAQIV 367
           T WI    YWA  N L NC  H G  Q V
Sbjct: 17  TLWIGDLQYWADENYLYNCFAHTGELQSV 45


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,551,922
Number of Sequences: 37544
Number of extensions: 245326
Number of successful extensions: 571
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)