Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A03
(843 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 34 0.13
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.22
SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 32 0.51
SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21) 32 0.67
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 32 0.67
SB_15403| Best HMM Match : CH (HMM E-Value=0) 32 0.67
SB_45072| Best HMM Match : Kazal_2 (HMM E-Value=5.8e-06) 31 0.89
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 2.0
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 30 2.7
SB_21310| Best HMM Match : Peptidase_C33 (HMM E-Value=3.4) 29 3.6
SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) 29 4.7
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 29 6.2
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 29 6.2
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07) 28 8.2
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 394 PAIQQCIRSCPVTAEYNPVCGTDNITY 474
P + +C+R CP A +PVCGTD TY
Sbjct: 19 PQVDKCVRPCP--AINDPVCGTDGKTY 43
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 400 IQQCIRSCPVTAEYNPVCGTDNITY 474
+ C+R CP A Y PVCGTD TY
Sbjct: 41 VDPCVRPCP--AIYMPVCGTDGKTY 63
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 406 QCIRSCPVTAEYNPVCGTDNITY 474
+C+R C T E NPVCG+D TY
Sbjct: 117 RCMRRC--TKELNPVCGSDGKTY 137
Score = 28.7 bits (61), Expect = 6.2
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 439 YNPVCGTDNITY 474
Y PVCG+DN+TY
Sbjct: 177 YQPVCGSDNVTY 188
>SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/20 (70%), Positives = 16/20 (80%), Gaps = 2/20 (10%)
Frame = +1
Query: 421 CP--VTAEYNPVCGTDNITY 474
CP VTA+YNPVCG+D TY
Sbjct: 10 CPMAVTADYNPVCGSDGRTY 29
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 376 GTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITYITL 483
GT + S A CI ++++PVCG D +TY L
Sbjct: 566 GTCSASSANASCICPTNCPSDWDPVCGDDGVTYQNL 601
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 409 CIRSCPVTAEYNPVCGTDNITYIT 480
C CP+T YN +CG+D ++Y++
Sbjct: 1610 CPERCPLT--YNLICGSDGVSYLS 1631
>SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21)
Length = 85
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 394 PAIQQCIRSCPVTAEYNPVCGTDNITY 474
P +C CP Y PVCG+DN+TY
Sbjct: 35 PKPDKCAPICPKI--YRPVCGSDNVTY 59
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 397 AIQQCIRSCPVTAEYNPVCGTDNITY 474
A+ +C ++C T EY P CGTD TY
Sbjct: 275 AVCECPKAC--TREYKPACGTDGNTY 298
Score = 31.5 bits (68), Expect = 0.89
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 406 QCIRSCPVTAEYNPVCGTDNITYITL 483
+C + C T +Y PVCG+DN TY L
Sbjct: 195 ECPKVC--TLDYTPVCGSDNKTYANL 218
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 364 PNNLGTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITY 474
P ++ A +C R+C T E PVCGTD TY
Sbjct: 103 PQSICVNVNGTATCECPRAC--TRELMPVCGTDQKTY 137
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 409 CIRSCPVTAEYNPVCGTDNITY 474
C+ + T EY PVCG+D TY
Sbjct: 40 CVCNEACTREYAPVCGSDGKTY 61
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 406 QCIRSCPVTAEYNPVCGTDNITYITL 483
+C+ S T EY PVCG+D TY L
Sbjct: 721 KCVCSAACTREYAPVCGSDGNTYNNL 746
>SB_45072| Best HMM Match : Kazal_2 (HMM E-Value=5.8e-06)
Length = 361
Score = 31.5 bits (68), Expect = 0.89
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 427 VTAEYNPVCGTDNITYIT 480
V +++NPVCG D++TY T
Sbjct: 138 VKSQFNPVCGADDVTYFT 155
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 409 CIRSCPVTAEYNPVCGTDNITYITL 483
C CP +E PVCGTD +TY L
Sbjct: 598 CPPGCP--SEVKPVCGTDGVTYDNL 620
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = +1
Query: 421 CPV--TAEYNPVCGTDNITY 474
CP+ T EY PVCGTD TY
Sbjct: 1295 CPIFCTYEYMPVCGTDGKTY 1314
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 424 PVTAEYNPVCGTDNITY 474
P TA+Y+PVC +D TY
Sbjct: 1816 PCTADYSPVCASDGQTY 1832
>SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)
Length = 1724
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 406 QCIRSCPV--TAEYNPVCGTDNITYIT 480
Q + CP+ T EY PVCG+D TY T
Sbjct: 42 QPVCECPMACTREYAPVCGSDGKTYPT 68
>SB_21310| Best HMM Match : Peptidase_C33 (HMM E-Value=3.4)
Length = 258
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 419 LRMHC*IAGDIVVVPRLLGARVVVKRCCCPGNXPWP 312
L C + G VV+P L AR + C G PWP
Sbjct: 216 LHEECVMRGHRVVIPSALRARESFRNCQDEGACPWP 251
>SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19)
Length = 92
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 409 CIRSCPVTAEYNPVCGTDNITY 474
C R+C T Y PVCGTD TY
Sbjct: 39 CNRAC--TKIYRPVCGTDGKTY 58
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Frame = +1
Query: 418 SCP--VTAEYNPVCGTDNITY 474
SCP T EY+P+CG+D TY
Sbjct: 5153 SCPDICTFEYSPLCGSDGKTY 5173
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 349 TTTRAPNNLGTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITY 474
T T P + T + C C T EY PVCGTD +Y
Sbjct: 5204 TCTSPPYSECTAINGSPVCTCNSIC--TLEYAPVCGTDGQSY 5243
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 28.7 bits (61), Expect = 6.2
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 439 YNPVCGTDNITY 474
Y PVCG+DN+TY
Sbjct: 34 YQPVCGSDNVTY 45
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +1
Query: 343 RLTTTRAPNNLGTTTMSPAIQQCIRSCPVTAEYNP-----VCGTDNITY 474
R T TRA T +P ++ +T++Y P VCGTDNITY
Sbjct: 1485 RATVTRA-----NCTNAPLLRTLFAKLWLTSQYCPASLDLVCGTDNITY 1528
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 409 CIRSCPVTAEYNPVCGTDNITY 474
C + CP + + VCGTDNITY
Sbjct: 1444 CSKVCPRSLDL--VCGTDNITY 1463
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 409 CIRSCPVTAEYNPVCGTDNITY 474
C + CP+T + PVC +DN TY
Sbjct: 1580 CPKICPITLD--PVCASDNNTY 1599
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 406 QCIRSCPVTAEYNPVCGTDNITY 474
+C+ CP PVCG+D +TY
Sbjct: 80 ECLSECP--DHIKPVCGSDGVTY 100
>SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07)
Length = 322
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 353 RLGLPTIWAPPQCRLQ 400
RL +P+IW PP+ RLQ
Sbjct: 174 RLAVPSIWVPPEQRLQ 189
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,265,273
Number of Sequences: 59808
Number of extensions: 275086
Number of successful extensions: 686
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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