Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_A03
(843 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114376-1|AAI14377.1| 691|Homo sapiens solute carrier organic ... 31 6.9
AY945934-1|AAX20114.1| 691|Homo sapiens solute carrier organic ... 31 6.9
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 31 6.9
AJ400749-1|CAB97007.1| 691|Homo sapiens organic anion transport... 31 6.9
AJ132573-1|CAB62577.1| 691|Homo sapiens organic anion transport... 31 6.9
AF205071-1|AAF20212.1| 691|Homo sapiens organic anion transport... 31 6.9
AF060500-1|AAD38323.1| 691|Homo sapiens liver specific transpor... 31 6.9
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 31 6.9
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 31 6.9
AB026257-1|BAA78639.1| 691|Homo sapiens organic anion transport... 31 6.9
>BC114376-1|AAI14377.1| 691|Homo sapiens solute carrier organic
anion transporter family, member 1B1 protein.
Length = 691
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 346 LTTTRAPNNLGTTTMSPAIQQCIRSCPVT-AEYNPVCGTDNITYIT 480
LT T NN T+ + C C +++ PVCG + ITYI+
Sbjct: 438 LTMTYDGNNPVTSHRDVPLSYCNSDCNCDESQWEPVCGNNGITYIS 483
>AY945934-1|AAX20114.1| 691|Homo sapiens solute carrier organic
anion transporter family, member 1B1 protein.
Length = 691
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 346 LTTTRAPNNLGTTTMSPAIQQCIRSCPVT-AEYNPVCGTDNITYIT 480
LT T NN T+ + C C +++ PVCG + ITYI+
Sbjct: 438 LTMTYDGNNPVTSHRDVPLSYCNSDCNCDESQWEPVCGNNGITYIS 483
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +1
Query: 406 QCIRSCPVTAEYNPVCGTDNITY 474
+C+++C ++ Y+PVCG+D +TY
Sbjct: 489 ECLQAC--SSLYDPVCGSDGVTY 509
>AJ400749-1|CAB97007.1| 691|Homo sapiens organic anion transporting
polypeptide 2 (OATP2) protein.
Length = 691
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 346 LTTTRAPNNLGTTTMSPAIQQCIRSCPVT-AEYNPVCGTDNITYIT 480
LT T NN T+ + C C +++ PVCG + ITYI+
Sbjct: 438 LTMTYDGNNPVTSHRDVPLSYCNSDCNCDESQWEPVCGNNGITYIS 483
>AJ132573-1|CAB62577.1| 691|Homo sapiens organic anion transporting
polypeptide 2 protein.
Length = 691
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 346 LTTTRAPNNLGTTTMSPAIQQCIRSCPVT-AEYNPVCGTDNITYIT 480
LT T NN T+ + C C +++ PVCG + ITYI+
Sbjct: 438 LTMTYDGNNPVTSHRDVPLSYCNSDCNCDESQWEPVCGNNGITYIS 483
>AF205071-1|AAF20212.1| 691|Homo sapiens organic anion transport
polypeptide 2 protein.
Length = 691
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 346 LTTTRAPNNLGTTTMSPAIQQCIRSCPVT-AEYNPVCGTDNITYIT 480
LT T NN T+ + C C +++ PVCG + ITYI+
Sbjct: 438 LTMTYDGNNPVTSHRDVPLSYCNSDCNCDESQWEPVCGNNGITYIS 483
>AF060500-1|AAD38323.1| 691|Homo sapiens liver specific transporter
protein.
Length = 691
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 346 LTTTRAPNNLGTTTMSPAIQQCIRSCPVT-AEYNPVCGTDNITYIT 480
LT T NN T+ + C C +++ PVCG + ITYI+
Sbjct: 438 LTMTYDGNNPVTSHRDVPLSYCNSDCNCDESQWEPVCGNNGITYIS 483
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +1
Query: 406 QCIRSCPVTAEYNPVCGTDNITY 474
+C+++C ++ Y+PVCG+D +TY
Sbjct: 470 ECLQAC--SSLYDPVCGSDGVTY 490
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +1
Query: 406 QCIRSCPVTAEYNPVCGTDNITY 474
+C+++C ++ Y+PVCG+D +TY
Sbjct: 489 ECLQAC--SSLYDPVCGSDGVTY 509
>AB026257-1|BAA78639.1| 691|Homo sapiens organic anion transporter
OATP-C protein.
Length = 691
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 346 LTTTRAPNNLGTTTMSPAIQQCIRSCPVT-AEYNPVCGTDNITYIT 480
LT T NN T+ + C C +++ PVCG + ITYI+
Sbjct: 438 LTMTYDGNNPVTSHRDVPLSYCNSDCNCDESQWEPVCGNNGITYIS 483
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,752,783
Number of Sequences: 237096
Number of extensions: 1411412
Number of successful extensions: 3759
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3692
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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