Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_A03
         (843 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   1.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.5  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   6.2  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 483 QGYVSYIISATNWIVLSGYWAATNALLNC 397
           +G  +Y+I   NW +    W   + L+NC
Sbjct: 256 KGVPTYLIKWKNWDLKYNTWEPISNLINC 284


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 478 LCKLYYQCHKLDCTQRLL 425
           LCKL+  C  L CT  +L
Sbjct: 108 LCKLWLTCDVLCCTASIL 125


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 478 LCKLYYQCHKLDCTQRLL 425
           LCKL+  C  L CT  +L
Sbjct: 108 LCKLWLTCDVLCCTASIL 125


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 478 LCKLYYQCHKLDCTQRLL 425
           LCKL+  C  L CT  +L
Sbjct: 108 LCKLWLTCDVLCCTASIL 125


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 443 IQFVALII*LT*PWKVDVCSGVWNQ 517
           I F+ LI   T PW +    GVW +
Sbjct: 163 ILFIVLIWTYTIPWALMPVMGVWGR 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,852
Number of Sequences: 438
Number of extensions: 2400
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)