Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P24
         (896 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.9  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 13/48 (27%), Positives = 14/48 (29%)
 Frame = +3

Query: 693 PPXXXXPXXPXPXPXXPXXPPXXXXXPPXPPPPXXXXPPXXXPPLSFP 836
           P     P    P P  P         PP P  P    PP   P +  P
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196



 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 521 PXPXXXPPPXPPPXPP 568
           P P   P P PP  PP
Sbjct: 176 PLPQVPPLPLPPIFPP 191


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/33 (33%), Positives = 11/33 (33%)
 Frame = +2

Query: 521 PXPXXXPPPXPPPXPPXXXPXPXXXPPGPPXXL 619
           P     P P   P PP     P    PGP   L
Sbjct: 226 PTGLIPPHPGLSPHPPHLSSHPAIVTPGPKQEL 258


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/33 (33%), Positives = 11/33 (33%)
 Frame = +2

Query: 521 PXPXXXPPPXPPPXPPXXXPXPXXXPPGPPXXL 619
           P     P P   P PP     P    PGP   L
Sbjct: 118 PTGLIPPHPGLSPHPPHLSSHPAIVTPGPKQEL 150


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 360 NRLICNYLSAFCNFLFNHQHSS 425
           +R   +++  +C FL+N  HS+
Sbjct: 131 HRYTLSFIENYCQFLYNCFHST 152


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 721 PXPPPXXPXPPP 756
           P P P  P PPP
Sbjct: 205 PEPVPSTPYPPP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,393
Number of Sequences: 336
Number of extensions: 5735
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)