Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P23
         (900 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.3  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   4.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.7  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   9.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 146 WEDEEGYPVSGQFSK 190
           W++EE  P+ G+F++
Sbjct: 584 WQNEENCPIGGKFAE 598


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +2

Query: 512 PPPXGXFVXXGFRSHKKPTFGXP 580
           PPP   +     R H  P FG P
Sbjct: 163 PPPPPVYTHHYARYHPYPNFGVP 185


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 503 KXPPPPXGXFVXXGFRSHKKPTFGXP 580
           K PPP     V  GF   KK   G P
Sbjct: 50  KSPPPLADAAVGKGFHPWKKSPQGAP 75


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 655 FFWPXQNPILFTSAIFLNYXE 717
           F WP    IL++S + LNY +
Sbjct: 212 FGWPIIMIILYSSLMVLNYID 232


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -3

Query: 295 LCNR-LTKKPIIILAQRAEDLPSPH 224
           LC +  TKKP+ ILA   E +P  +
Sbjct: 36  LCKKHKTKKPVQILALLQEIIPKSY 60


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -3

Query: 295 LCNR-LTKKPIIILAQRAEDLPSPH 224
           LC +  TKKP+ ILA   E +P  +
Sbjct: 36  LCKKHKTKKPVQILALLQEIIPKSY 60


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 88  IHFDLCQVS 62
           IHFDLCQ +
Sbjct: 212 IHFDLCQAA 220


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 88  IHFDLCQVS 62
           IHFDLCQ +
Sbjct: 208 IHFDLCQAA 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,668
Number of Sequences: 336
Number of extensions: 3616
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)