Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P23
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p pro...    32   1.2  
AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-P...    32   1.2  
BT001332-1|AAN71087.1|  886|Drosophila melanogaster AT18855p pro...    29   6.6  
AY118833-1|AAM50693.1|  489|Drosophila melanogaster GM01981p pro...    29   6.6  
AE014297-980|AAF54409.1|  874|Drosophila melanogaster CG8273-PA ...    29   6.6  

>AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p
           protein.
          Length = 121

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +2

Query: 83  MNSKLLYFFATVLVCVNAE-VYWEDEEGYPVSGQFSKRHPRDVTWDKQVG 229
           MNS L+    + L  V A  + W +E+        S  HP  V W   VG
Sbjct: 1   MNSTLVILLLSALALVQARNIRWSEEDNSSQGPSLSHPHPHSVNWPCDVG 50


>AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-PA
           protein.
          Length = 121

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +2

Query: 83  MNSKLLYFFATVLVCVNAE-VYWEDEEGYPVSGQFSKRHPRDVTWDKQVG 229
           MNS L+    + L  V A  + W +E+        S  HP  V W   VG
Sbjct: 1   MNSTLVILLLSALALVQARNIRWSEEDNSSQGPSLSHPHPHSVNWPCDVG 50


>BT001332-1|AAN71087.1|  886|Drosophila melanogaster AT18855p
           protein.
          Length = 886

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 297 LCVTGLPKSPSSFWPSVPKTFPPP 226
           L  T LP  P S  P+VPK F PP
Sbjct: 578 LAATQLPTVPQSVPPTVPKEFAPP 601


>AY118833-1|AAM50693.1|  489|Drosophila melanogaster GM01981p
           protein.
          Length = 489

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 297 LCVTGLPKSPSSFWPSVPKTFPPP 226
           L  T LP  P S  P+VPK F PP
Sbjct: 181 LAATQLPTVPQSVPPTVPKEFAPP 204


>AE014297-980|AAF54409.1|  874|Drosophila melanogaster CG8273-PA
           protein.
          Length = 874

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 297 LCVTGLPKSPSSFWPSVPKTFPPP 226
           L  T LP  P S  P+VPK F PP
Sbjct: 566 LAATQLPTVPQSVPPTVPKEFAPP 589


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,476,614
Number of Sequences: 53049
Number of extensions: 733831
Number of successful extensions: 1362
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)