Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P23
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30662-1|CAA83137.1|  344|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    29   6.0  

>Z30662-1|CAA83137.1|  344|Caenorhabditis elegans Hypothetical
           protein T16H12.1 protein.
          Length = 344

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -1

Query: 270 PSSFWPSVPKTFPPPTCLSQVTSRGCRFEN*PLTGYP 160
           P  F  + PK+ P P C S   +  C  EN P  GYP
Sbjct: 57  PVHFSQTNPKSTPEPPCTSSSGAGDCH-ENLPADGYP 92


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = -1

Query: 279 PKSPSSFWPSVPKTF---PPPTCLSQVTSRGCRFEN*PLTGYPSSSSQ*TSALTHTRTVA 109
           P+SP   +PSVP TF     P    + TS      +   T   S+++  T A T T T+ 
Sbjct: 177 PQSPKPTYPSVPSTFEFEKYPKSTEEPTSTPSTSTSTTTTTTTSTTTTTTEAPTTTTTIK 236

Query: 108 KKYNSLE 88
               S+E
Sbjct: 237 TTTESIE 243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,660,787
Number of Sequences: 27780
Number of extensions: 360726
Number of successful extensions: 706
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)