Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P21
(910 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC685.07c |rpl2701|rpl27-1|60S ribosomal protein L27|Schizosac... 157 2e-39
SPCC74.05 |rpl2702|rpl27-2|60S ribosomal protein L27|Schizosacch... 155 1e-38
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.074
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.074
SPCC622.18 |rpl6||60S ribosomal protein L6|Schizosaccharomyces p... 31 0.17
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.17
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.91
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.2
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.2
SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces pomb... 28 2.1
SPAC1805.13 |rpl14||60S ribosomal protein L14|Schizosaccharomyce... 27 2.8
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 27 2.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 4.5
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 27 4.9
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.9
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 26 8.5
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 26 8.5
>SPBC685.07c |rpl2701|rpl27-1|60S ribosomal protein
L27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 136
Score = 157 bits (381), Expect = 2e-39
Identities = 69/136 (50%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 261
M KI+KPGKV L+ GR+AG+K ++++ D+G+ P+GHA VAG++RYP KV K MG
Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAK 60
Query: 262 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEE 435
+I +RS++KPF+KVVNYNHLMPTRY ++ K +A K+P +R R + FEE
Sbjct: 61 RIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEE 120
Query: 436 RYKSGKNKWFFQKLRF 483
+Y+SGK+ WFF LRF
Sbjct: 121 KYQSGKSAWFFTPLRF 136
>SPCC74.05 |rpl2702|rpl27-2|60S ribosomal protein
L27|Schizosaccharomyces pombe|chr 3|||Manual
Length = 136
Score = 155 bits (375), Expect = 1e-38
Identities = 67/136 (49%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 261
M KI+KPGKV LV GR+AG+K ++++N D+G+ P+GHA VAG++RYP KV K MG
Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAK 60
Query: 262 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEE 435
+I KRS++KPF+KV+NYNHLMPTRY ++ K + +P++R + + FEE
Sbjct: 61 RIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEE 120
Query: 436 RYKSGKNKWFFQKLRF 483
+Y++GK+ WFF LRF
Sbjct: 121 KYQTGKSAWFFTPLRF 136
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.074
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +3
Query: 693 PPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPP----XPPXKNXXPPPXXP-FPXXFPP 851
PP P + P + + PPP P APP PP + PPP P P PP
Sbjct: 130 PPTPQSELRPPTSAPP--RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = +3
Query: 693 PPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPPXPPXKNXXPPPXXP-FPXXFPP 851
PP P P + PP P PP P PP P P PP
Sbjct: 144 PPRPSIPPPSPASAPPI-PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = +3
Query: 693 PPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPPXPPXKNXXPPPXXPFPXXFPP 851
PP P P PP P PP P P P PP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.074
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +2
Query: 761 PPXXFXGXPXSPXQKPXSPXXXPLPFXFPPXPRXRXXXXXFPPTKXPPP 907
PP G P +P P +P PLP P P PP P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 32.3 bits (70), Expect = 0.098
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 693 PPPPHXKXXGPXTXXXFGQXXXPPPPPXXAP 785
PPPP G G+ PPPPP AP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 7/53 (13%)
Frame = +3
Query: 693 PPPPHXKXXG-PXTXXXFGQXXXPPPPP------XXAPPXPPXKNXXPPPXXP 830
PPPP + G P PPPPP + P PP PPP P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/74 (24%), Positives = 19/74 (25%), Gaps = 1/74 (1%)
Frame = +3
Query: 612 PGXGXSPXXXGXXGPPKXXKXXLGGXXPPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPP- 788
P S G PP + PPP G PP PP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 789 XPPXKNXXPPPXXP 830
PP PP P
Sbjct: 423 LPPSAPPSLPPSAP 436
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 759 PPPPPXXAPPXPPXKNXXPPPXXPFPXXFPP 851
PP P APP P PP P PP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
>SPCC622.18 |rpl6||60S ribosomal protein L6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 195
Score = 31.5 bits (68), Expect = 0.17
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 73 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 174
P+K+ + PG V ++L+GR+ G++ +V+ ++
Sbjct: 45 PTKLRASLAPGTVCILLAGRFRGKRVVVLSQLED 78
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +3
Query: 612 PGXGXSPXXXGXXGPPKXXKXXLGGXXPPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPPX 791
P P G P K G PP P P G P PPP APP
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAG--VPPVPPPSEAPPVPKPSVG--VPPVPPPSTAPPV 1219
Query: 792 PPXKNXXPPPXXP 830
P PP P
Sbjct: 1220 PTPSAGLPPVPVP 1232
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +3
Query: 693 PPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPPXPPXKNXXPPPXXPFPXXFPP 851
PP P P G PPP P + P P P P PP
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 693 PPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPPXPPXKNXXPPPXXPFPXXFPP 851
PP P P P P P APP P PP P P PP
Sbjct: 1092 PPVPKPSVAAPPVPKP-SVAVPPVPAPSGAPPVPKPSVAAPP--VPVPSGAPP 1141
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 758 PPPXXFXGXPXSPXQKPXSPXXXPLPFXFPPXPRXRXXXXXFPPTKXPPP 907
P P G P P P P P PP P+ PP PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPP-PSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 693 PPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPPXPPXKNXXPPPXXP 830
PP P P G P P APP P + PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPV-PKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/43 (27%), Positives = 12/43 (27%)
Frame = +3
Query: 693 PPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPPXPPXKNXXPPP 821
PP P P P P PP PP P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 25.8 bits (54), Expect = 8.5
Identities = 19/73 (26%), Positives = 22/73 (30%)
Frame = +3
Query: 612 PGXGXSPXXXGXXGPPKXXKXXLGGXXPPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPPX 791
P +P G P K + PP P P G P P P A P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAA--PPVPKPSVAVPPVPAPSGAP--PVPKPSVAAPP 1132
Query: 792 PPXKNXXPPPXXP 830
P + PP P
Sbjct: 1133 VPVPSGAPPVPKP 1145
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 759 PPPPPXXAPPXPPXKNXXPPPXXPFPXXFPP 851
P P P APP P PP P P PP
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPP--VPAPSGAPP 1160
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.91
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 765 PPPXXAPPXPPXKNXXPPPXXP 830
PPP APP P PPP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +1
Query: 796 PPKTXFPXXXXPSLXXSPPPXXPXXAXXFPXXXXPPXP 909
PP+ P P + PPP P P PP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +1
Query: 700 PPTXXXPXXXPXXFLAXXXPPPXXLXXXPLXPPPKTXFPXXXXPSLXXSPPPXXP 864
PP P PPP + P PP P P L S P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +3
Query: 765 PPPXXAP-PXPPXKNXXPPPXXPFPXXFPP 851
PP AP P PP + PPP P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 744 GQXXXPPPPPXXAPPXPPXKNXXPPPXXP 830
G PPPPP PP P PPP P
Sbjct: 7 GNPPPPPPPPGFEPPSQP-----PPPPPP 30
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 768 PPXXAPPXPPXKNXXPPPXXPFP 836
PP PP PP PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 693 PPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPPXPPXKNXXPP 818
P P P G PPPPP A PP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +1
Query: 757 PPPXXLXXXPLXPPPKTXFPXXXXPSLXXSPPPXXPXXAXXFPXXXXPPXP 909
PPP P P P PPP P A P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +3
Query: 693 PPPPHXKXXGPXTXXXFGQXXXPPPPPXXAPPXPP----XKNXXPPPXXPFP 836
PPPP P T PP P PP PP PPP P P
Sbjct: 732 PPPPPPAVIVP-TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 225
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 253 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDF-SFEKFSAKDLKDP 387
G + I R K P K+VNYNH + + +F K D+ DP
Sbjct: 28 GNHWIFARFKFYPLNKIVNYNHFHSSSCQSEAKNFYKQFEGDISDP 73
>SPAC1805.13 |rpl14||60S ribosomal protein L14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 134
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 88 KIMKPGKVVLVLSGRYAGRKAIVVKNYD 171
+ ++ G+VVLV G Y G+ A++V D
Sbjct: 6 RYVEVGRVVLVTKGEYTGKLAVIVDIVD 33
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 27.5 bits (58), Expect = 2.8
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = -2
Query: 336 ITCWHQVIIVYNL-HERLYLGPLVDFILSHPLVHFPG-VPVDTSDESMPVRLVGGTFVVI 163
+ W + +I + H +L + P+ F H + FP V V TS + +
Sbjct: 485 LALWKKQVIFSKIGHPKLLVMPISSF---HCVQRFPDLVCVQTSTAETFLSVDRELTTYD 541
Query: 162 LDYDSLATRVPAT*DQHYFTRLHYLTHLGGIFPLLVDIESK 40
L+ L P+ Q++ +H+L +G +FP LV ++ +
Sbjct: 542 LNTIKLLNTAPSRTAQNWLFIMHHLEIVGYLFPHLVHLDKQ 582
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +1
Query: 760 PPXXLXXXPLXPPPKTXFPXXXXPSLXXSPPPXXPXXA 873
P + P PP P PS PPP P A
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPA 198
Score = 20.6 bits (41), Expect(2) = 4.5
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +1
Query: 847 PPPXXPXXAXXFPXXXXPPXP 909
PP P A P PP P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPP 244
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 188 LSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEGYSLY 60
L E+P + F T+ AY P S T+ G + G +Y
Sbjct: 689 LEEIPYNKFFKTVEKNEAYNPSSKSATIDGLQRYTSMIGNQIY 731
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -2
Query: 909 GGGGXXVGGKXXXXXRXRGXGGXXKGRGXXXGEXGFWXGXKGXPXKXXGG 760
GG G GG+ R G GG GRG G G G G GG
Sbjct: 23 GGRGGFGGGRGGA--RGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 282 LGPLVDFILSHPLVHFPGVPVDTSDESMPVRLVGGTFV 169
LGP+ + + L HFP DT + S P GGT V
Sbjct: 1364 LGPIGETFEVNGLSHFPSDIEDTIERSHPRIARGGTAV 1401
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 384 VFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLY 283
V+QVFC F A+ I +Q++ V NL E Y
Sbjct: 315 VYQVFCTNFPNAQQLIIDNQNQLLKVANLLEPSY 348
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,024,825
Number of Sequences: 5004
Number of extensions: 60241
Number of successful extensions: 353
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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